SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSECAP00000004749 from Equus caballus 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSECAP00000004749
Domain Number 1 Region: 208-474
Classification Level Classification E-value
Superfamily L domain-like 1.87e-36
Family Internalin LRR domain 0.013
Further Details:      
 
Domain Number 2 Region: 768-920
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 3.27e-33
Family Toll/Interleukin receptor TIR domain 0.00024
Further Details:      
 
Domain Number 3 Region: 501-698
Classification Level Classification E-value
Superfamily L domain-like 0.000000000119
Family Ngr ectodomain-like 0.031
Further Details:      
 
Domain Number 4 Region: 53-279
Classification Level Classification E-value
Superfamily L domain-like 0.00000000434
Family Internalin LRR domain 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000004749   Gene: ENSECAG00000006701   Transcript: ENSECAT00000006656
Sequence length 925
Comment pep:known chromosome:EquCab2:1:156829633:156832407:1 gene:ENSECAG00000006701 transcript:ENSECAT00000006656 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VPRMERPLLSFTLLSPLLLGLMSLGRMSWAWTAPDCTIADSSLLPNISYYIPFCSLAPGL
HLFASCSNVKDLAQTLTAVPRDIEALCLQGTVPFLPADAFGHFTTLQLLRLQLGTISITS
GTFQGLNQLQHLSFEHHAPCCLSLFLPPDALEHLRLLNTLSFHGYCLNYSQNIQLPISLR
HLTVRHSCLIELRELQGLFPNLVPGSSPTTSPSPWTSFLEELDLSANLQLSQVGNRALDG
LQLRSLRLDGTPLSALDLLGSGLLHLDSLSLEGTRTERLPGNVTRYFELVALDLGRNQIQ
NLEDEDLLSCQSLEFLSLHANGLQLLPSRFLNDLPQLQRLNLSMNKLGPTLVLPEGLVSS
NLRVLDLSHNELCVLPYRAFSSLPQLQELRLSGNNISNLSSESLEGLRWLKTLDLSWNQI
KTLKPGWLSSLPALTSLNLLGTHLEHISGKQLQGPQKLSHLQLGSLEMLEIYPPWPPALL
SLEVRADVYIQFGVPSGEPFLFLENLTLQTSNMLLQLDNNTIHFPSLRHLTLRGCSPYIL
SGHQSHRFFPQLPLLEHLHFWSDHEGADDLHLFGMPSLRVLELGDLDFLCQPTSVKLEKL
LKELPQLQVLVLSNLNLGNLSASSFRGLGPLRLLLLNSEWALGLDSSLQELIPQMPQYVY
FSDITFTCQCESSWVGPWATQAPNTFVYGLEKSICMANASDYSKTPLLSFLSGHCSHDPE
FQSFLTSFTLVFLLIFLSLLGCPKWPWLHYLQTLFHAWWWKLGGWRPRNQFHYDVFISYC
EQDRAWVLKELVPALEKPLPVGEGLRLCLPERDFGVGQDRMDAMVASMESSRATLCVLSC
QALGSPWCNLELRLATYHLMAKPGTARLLLLFLEPIDRRQLHSYHRLARWLQKEDYFDVS
QGRIEWDAFSEKLRKRLRKAGQERE
Download sequence
Identical sequences F7ACB7
9796.ENSECAP00000004749 ENSECAP00000004749 ENSECAP00000004749

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]