SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSECAP00000008292 from Equus caballus 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSECAP00000008292
Domain Number 1 Region: 58-196,368-594
Classification Level Classification E-value
Superfamily RNI-like 1.1e-43
Family Cyclin A/CDK2-associated p19, Skp2 0.078
Further Details:      
 
Domain Number 2 Region: 669-817
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 5.36e-38
Family Toll/Interleukin receptor TIR domain 0.0000431
Further Details:      
 
Domain Number 3 Region: 208-389
Classification Level Classification E-value
Superfamily L domain-like 0.0000034
Family Internalin LRR domain 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000008292   Gene: ENSECAG00000010339   Transcript: ENSECAT00000010707
Sequence length 843
Comment pep:known chromosome:EquCab2:25:21966163:21976507:1 gene:ENSECAG00000010339 transcript:ENSECAT00000010707 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MMPPTRLAGTLIPAMAFLSCLRPESWDPCVQVVPNTTYQCMDLNLYKIPENIPTSTKELD
LSFNPLKELGSHSFSNFPELQVLDLSRCEIEMIEDDAYQGLNHLSTLILTGNPIRSLALG
AFSGLSSLQTLVAVETKLSSLEKFPIGHLKTLKELNVAHNLIHSFKLPEYFSKMPNLEHL
DLSNNKIQNISHEDLRVLHQMPLLNLSLDLSLNPLEFIQPDAFKEIKLHKLTLRSNFDSI
DVMKSCIQGLAGLKVNRLVLGEFKNERKLERFDTSALRGLHNLTIEEFRLAYIDNYSSKD
SIDLLNCLANISKISLVSLDLGNLQDFPKGFGWQDFELVNCRIEGFPTLELTSLKRLVFT
SNKDMKSFNEVKLPSLEFLDLSRNRLSFKSCCSEADLKTTRLKHLDLSFNDVISMSSNFM
GLEQLEHLDFQHSTLKQASDFPVFLSLKNLRYLDISYTNTRVVFHGIFDGLVSLQVLKMA
GNSFKDNFLPNIFREMTNLTTLDLSKCNLEQVSQEAFCLLPRLRVLNMSHNNLLFLDMLP
YKPLHSLQILDCSFNRIVAFKWQELQHFPSSLASLNLTQNDFACVCEYQSFLQWVKDQRQ
LLVEVEHLVCAIPLQMRGMPVLGFNNATCQISKTIVGGSVFSILMVSVIAVLVYKFYFHL
MLLAGCKKYGRGESIYDAFVIYSSQDEDWVRNELVKNLEEGVPPFQLCLHYRDFIPGVAI
AANIIQEGFHKSRKVIVVVSQHFIQSRWCIFEYEIAQTWQFLSSRAGIIFIVLHKLEKSL
LRQQVELYRLLNRNTYLEWEDSVLGRHIFWRRLRKALLDGKPWSPAGTADAAESRQHDAE
TST
Download sequence
Identical sequences F6RL35
ENSECAP00000008292 NP_001093239.2.31192 9796.ENSECAP00000008292 ENSECAP00000008292

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]