SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSECAP00000011446 from Equus caballus 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSECAP00000011446
Domain Number 1 Region: 70-164
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000000000176
Family Canonical RBD 0.0019
Further Details:      
 
Domain Number 2 Region: 751-835
Classification Level Classification E-value
Superfamily PWI domain 0.00000196
Family PWI domain 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000011446   Gene: ENSECAG00000013395   Transcript: ENSECAT00000014329
Sequence length 843
Comment pep:known chromosome:EquCab2:24:18791247:18847226:1 gene:ENSECAG00000013395 transcript:ENSECAT00000014329 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSFPPHLNRPPMGIPALPPGIPPPQFPGFPPPVPPGTPMIPVPMSIMAPAPTVLVPTVSM
VGKHLGARKDHPGLKTKENDENCGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQ
GASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKASN
GNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQESDSHPRKKKKEK
KEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEK
ERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRD
RDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERE
REREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAE
REEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREK
EELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKREEP
MEEEEEPEQKPCLKPTLRPISSAPSVSSASGNATPNTPGDESPCGIIIPHENSPDQQQPE
EHRPKIGLSLKLGASNSPGQPNSVKRKKLPVDSVFNKFEDEDSDDVPRKRKLVPLDYGED
DKNAPKGTVNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSILMERRIRPWINKKII
EYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIG
LVK
Download sequence
Identical sequences F7BHK6
XP_001916318.1.31192 XP_014691158.1.49734 ENSECAP00000011446 9796.ENSECAP00000011446 ENSECAP00000011446

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]