SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSECAP00000015830 from Equus caballus 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSECAP00000015830
Domain Number 1 Region: 429-677
Classification Level Classification E-value
Superfamily Pectin lyase-like 1.06e-23
Family Galacturonase 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000015830   Gene: ENSECAG00000018185   Transcript: ENSECAT00000019346
Sequence length 677
Comment pep:known chromosome:EquCab2:5:19964783:19996763:-1 gene:ENSECAG00000018185 transcript:ENSECAT00000019346 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GRRGSGREAWLTAARALAALRRWRPGPALRCPRTRSEASAPGRRGEKVSPPVRGSAEPGP
LKGSGSTASPVRSVMASPRPVKGKAGREAARRRLQLPPASEAEGPGEGAGEEEEEPLLSV
PEEEEEAQPLPPLSVSPMRGMWRGEKVALYCDEVLQGCKAEDADEAMSKYLSEKLKLKDK
WLGVWKTNPELFFVKYEEASIPFVGILVEVTCKPRQSLSSCFKVTVSVAEPFSCNIANIP
RDLVDEILEELEHSVPLLEVYPVEGQDSDIHDIALALEVVRFFYDFLWRDWDDEESCENY
TALIEERINLWCDIQDGTIPGPIAQRFKKTLEKYKNKRVELIEYQSNIKEDPSAAEAVEC
WKKYYEIVMLCGLLKMWEDLRLRVHGPFFPRILRRRKGRRDFGKTITHIVAKVMTTDMVK
DLSSDTLLQQHDDLDLALDSCYSGDTVVIFPGEYQAINLALLTDDIIIKGVGKREEIMIT
SEPSHDSFVVSKADNVKLMHLSLIQQGTVDGIVVVESGHLTIENCILKCEGTGVCVLTGA
ALTITDSEITGAQGAGVELYPGSIAILERNEIHHCNNLRTSDSSKSTLGGVNMKVLPAPK
LKMTNNHIYNNNGYGVSILQPTEQFFIVAEEALNKGAASGDKKDDNMLSKVIQNLNLEMN
NNKIEANLKGDIRIVTS
Download sequence
Identical sequences F6SKW3
ENSECAP00000015830 ENSECAP00000015830 9796.ENSECAP00000015830

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]