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  Home > Genomes > Equus caballus 69_2 > ENSECAP00000017252

Domain assignment for ENSECAP00000017252 from Equus caballus 69_2

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSECAP00000017252
Domain Number 1 Region: 2-188,334-540
Classification Level Classification E-value
Superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase 3.14e-48
Family Oligoxyloglucan reducing end-specific cellobiohydrolase 0.0079
Further Details:      
 
Domain Number 2 Region: 666-919
Classification Level Classification E-value
Superfamily YWTD domain 6.02e-46
Family YWTD domain 0.00000949
Further Details:      
 
Domain Number 3 Region: 1465-1650
Classification Level Classification E-value
Superfamily Fibronectin type III 3.99e-29
Family Fibronectin type III 0.0016
Further Details:      
 
Domain Number 4 Region: 1840-2013
Classification Level Classification E-value
Superfamily Fibronectin type III 6.23e-17
Family Fibronectin type III 0.0054
Further Details:      
 
Domain Number 5 Region: 1322-1359
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000563
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 6 Region: 1229-1267
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000576
Family LDL receptor-like module 0.00097
Further Details:      
 
Domain Number 7 Region: 1101-1139
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000681
Family LDL receptor-like module 0.00071
Further Details:      
 
Domain Number 8 Region: 1058-1099
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000209
Family LDL receptor-like module 0.00076
Further Details:      
 
Domain Number 9 Region: 981-1019
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000681
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 10 Region: 1144-1177
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000223
Family LDL receptor-like module 0.0018
Further Details:      
 
Domain Number 11 Region: 1274-1309
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000602
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 12 Region: 1655-1784
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000157
Family Fibronectin type III 0.007
Further Details:      
 
Domain Number 13 Region: 1376-1413
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000017
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 14 Region: 1416-1455
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000393
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 15 Region: 1022-1061
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000183
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 16 Region: 1181-1216
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000275
Family LDL receptor-like module 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000017252   Gene: ENSECAG00000019083   Transcript: ENSECAT00000020979
Sequence length 2120
Comment pep:known chromosome:EquCab2:7:28934178:29071598:1 gene:ENSECAG00000019083 transcript:ENSECAT00000020979 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
QVSLNDSHNQMVVHWAGEKSNVIVALARDSLALVRPKSSDVYVSYDYGKSFKKISEKLNF
GVGNNSEAVISQFYHSPADNKRYIFADAYAQYLWITFDFCNTIQGFPIPFRAGDLLLHSK
AADLLLGFDRSHPNKQLWKSDDFGQTWVLIQEHVKSFSWGIDPYDEPTTIYIERHEPFGF
STVFRSTDFFQSLENQEVILEEVKDFQLRDKYMFATRVLYLLNSPEPSSVQLWVSFDRKP
MQAAQFVTRHPINEYYIADASEDQVFVCVSHSNNRTNLYISEAEGLKFSLSLENVLYYSP
GGAGSDTLVRYFANEPFADFHRVEGLQGVYIATLINGSMSEENMRSVITFDKGGTWEFLQ
APAFTGYGEKINCELSQGCSLHLAQRLSQLLNLQLRRMPILSKESAPGLIIATGSVGKNL
ASKTNVYISSSAGARWREALPGPHYYTWGDHGGIIMAIAQGMETNELKYSTNEGETWKTF
IFSEKPVFVYGLLTEPGEKSTVFTIFGSNKENVHSWLILQVNATDALGVPCTENDYKLWS
PSDERGNECLLGHKTVFKRRTPHATCFNGEDFDRPVVVSNCSCTREDYECDFGFKMSEDL
LLEVCVPDPEFPGRAYSPPVPCPEGSTYRRTRGYRKISGDTCSGGDVEARLEGELVPCPL
AEENEFMLYALRKSIYRYDLASGATEQLPLTGLRAAVALDFDYERNCLYWSDLALDIIQR
LCLNGSTGQEVIINSGLETVEALAFDPLSQLLYWVDAGFKKIEVANPDGDFRLTIVNSSV
LDRPRALVLMSQKGLMFWTDWGDLKPGIYRSNMDGSAVHRLVSEDVKWPNGIAVDDQWIY
WTDAYLDCIERITFSGQQRSIILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQM
AILASQLTGLMDMKIFYKGKTTGSNACVPQPCSLLCLPKANNSKSCRCPEGVASSVLPSG
DLMCECPHGYQLRNNTCVKEENTCLRNQYRCSNGKCINSIWWCDFDNDCGDMSDERNCPT
TICDLDTQFRCQESGSCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSS
WVCDGDNDCRDWSDEANCTAIYHTCEASNFQCHNGHCIPQRWACDGDTDCQDGSDEDPVN
CEKKCNGFRCPNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTRFMDFVCKNRQQCLFHSM
VCDGIVQCRDGSDEDPEFAGCSHDPEFRKVCDEFSFQCLNGVCISLIWKCDGMDDCGDYS
DEANCEYPTEAPNCSRYFQFQCENGHCVPNRWKCDRENDCGDWSDERDCGDSYLLPSPTP
EPSTCLPNYYRCSNGACVMDSWVCDGYRDCADGSDEEVCPSPANVTPASTPTQFGRCDRF
EFECHQPKKCIPNWKRCDGHQDCQDGQDEANCPTHSTLTCMSSEFKCEDGEACIVLSERC
DGFLDCSDESDEKACSDELTVYKVQNLQWTADFSGDVTLTWTRPKKMPSASCVYNVYYRV
VGESMWKTLETHSNKTNMILKVLKPDTTYQVKVQVQCLSKVHNTNDFVTLRTPEGLPDAP
QNLQLSLHREVEGVIVGQWTPPAHTHGLIREYIVEYSRSGSKMWASQRAASNFTEIKNLL
VSAQYTVRVAAVTSRGIGNWSDSKSITTIKGKVIPPPDIHIDSYSENSLSFTLSMDNDIK
VNGYVVNLFWAFDSHKQEKRTLNFQGSMLSHKVGNLTAHTAYEISAWAKTDLGDSPLAFE
HVTTKGVRPPAPSLKAKAINQTAVECTWTGPRNVVYGIFYATSFLDLYRNPKSLTTSLHN
KTVIVSRDEQYLFLVRVVVPYEGPSSDYVVVKMIPDSRLPPRHLHAVHITKTSAVLKWES
PYDSPDQDLLYAIAVKDLIRKSDRSYKVKSCNSTVEYTLNKLEPGGKYHIIVQLGNMSKD
SNIKITTVSLSAPDALKIITENDHVLLFWKSLALKEKYFNESRGYEIHMFDSAMNITAYL
GNTTDNFFKISNLKLGHNYTFTVQARCLFGSQICGEPAVLLYDDLGSGGDASAFQAARST
DVAAVVVPILFLILLSLGVGFAILYTKHRRLQSSFTAFANSHYSSRLGSAIFSSGDDLGE
DDEDAPMITGFSDDVPMVIA
Download sequence
Identical sequences F7CH72
ENSECAP00000017252 ENSECAP00000017252

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.