SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|310658609|ref|YP_003936330.1| from Clostridium sticklandii DSM 519

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|310658609|ref|YP_003936330.1|
Domain Number 1 Region: 2-188
Classification Level Classification E-value
Superfamily HD-domain/PDEase-like 1.66e-74
Family HD domain 0.000000805
Further Details:      
 
Domain Number 2 Region: 178-391
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 4.25e-66
Family RelA/SpoT domain 0.0000047
Further Details:      
 
Domain Number 3 Region: 374-446
Classification Level Classification E-value
Superfamily TGS-like 1.05e-22
Family G domain-linked domain 0.053
Further Details:      
 
Domain Number 4 Region: 653-727
Classification Level Classification E-value
Superfamily ACT-like 0.000000000162
Family AF1403 N-terminal domain-like 0.072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|310658609|ref|YP_003936330.1|
Sequence length 729
Comment GTP pyrophosphokinase [[Clostridium] sticklandii]
Sequence
MLENLLLMIEQYNPDADLDIVIKAYNYAYNAHEGQYRKSGEKYIIHPLEVAKILAELELD
VFTIAAGLMHDVVEDTEVSFSDIERLFGTEVAELVDGVTKLGKIEYKSKEETQAENLRKM
FMAMGKDIRVILIKLADRLHNMRTLKYMSEEKAKEKATETIEIYAPIAHRLGISRVKWEM
EDIALRYLDPEGYYDLIEKVSKKRREREAYIQGVIDLLKNKLEEANIEGDIKGRAKHFYS
IYRKMKYQSKSFEEIYDLMAVRILVDSLKDCYGVVGIVHTIWKPMPGRFKDYIAMPKPNM
YQSLHTTVLGPDGEPLEIQIRTKEMHRTAEFGIAAHWKYKEGKIDPNESDMDKKLSWLRQ
MMEWQKDVSDPTEFMESLKIDLFVNQVFVFTPKGDVIELPAESTPLDFAYKVHSGVGNRC
IGAKVDGRIVPLDYKLKNGNIVEVMTSSNSNGPSRDWLNIVKSSHAKNKIRQWFKKERRE
ENIEKGKEILERETKRQGFPIGDFLKHKYLVQVAKLVTQGSEDDLYAALGYGGITLSQVM
PRLKEKYEADNHKLKEEKIQERIQEKTIQKSAQKKKTGNQGVHVKGIDNILIRFAKCCNP
LPGDDIVGYITKGRGVSIHRSDCPNTLNDDDASRGRLIDVEWDIDKNKNKNFEAEIQIKA
IDRRGLFTDVSRILADEKITVNGINARTSKDGTAIMNVVLEVLSKEQLKSIMNQIRRVEG
VIDIFRLFN
Download sequence
Identical sequences E3PRC1
gi|310658609|ref|YP_003936330.1| WP_013361518.1.92012

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]