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Domain assignment for gi|386038941|ref|YP_005957895.1| from Paenibacillus polymyxa M1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|386038941|ref|YP_005957895.1|
Domain Number 1 Region: 559-759,789-925
Classification Level Classification E-value
Superfamily (Trans)glycosidases 7.72e-36
Family beta-glycanases 0.007
Further Details:      
 
Domain Number 2 Region: 5-234
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 6.62e-18
Family Leech intramolecular trans-sialidase, N-terminal domain 0.025
Further Details:      
 
Domain Number 3 Region: 432-539
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.0000425
Family CBM4/9 0.017
Further Details:      
 
Domain Number 4 Region: 1152-1242
Classification Level Classification E-value
Superfamily Glycosyl hydrolase domain 0.0000432
Family alpha-Amylases, C-terminal beta-sheet domain 0.059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|386038941|ref|YP_005957895.1|
Sequence length 1246
Comment alpha-N-arabinofuranosidase 1 [Paenibacillus polymyxa M1]
Sequence
MTKFQDQIIARYKFDDAENVGKDSSGQGNDGIASGTAAPTISHTTGRAALALEGGPNGTS
YIQLPSDLFKDVSDNTGVTVTAWVNFGRFTDMWERVFDFGKSHTGPYMFMTRNLRGTLFT
EADLSVDPGRGFVRDEWMHIALSVIGTEGGTLSSAGPVVYVNGEVAADGSISQTSSGNYA
KLRKWFETFADSTNYSNNFIGRSQHAADVDFAGLVSDFRIYKAGLTADEVIEVMCDSLTD
EEIVKLARDKYLSFPTTIITKDISLPTVLMGGRVEVTWKSSQPSILSDNGRVQAITSAQG
VTVTALLTRGSSRIEESFEVSVLPEQLPPYTLTIHGNKEVVDVSEVMYGLFYEDINNAAD
GGIYAELVQNRSFESFEFDTYSHASGECGCSTGRNRNPLFAWSGDTDKMNPQHSGGLNEF
LGAKDKDVNSYYVTVADGATIRNKGFSDSNQNCAMSIQEGAKYEFTIWAKADSTGTITLQ
LQDSKEKDISDSVTVQVEGGSTWKKYGVDSKLVLTGTATVLGQLALTFEGDISIDMVSLF
PQDVWGAGEEEQSPSAHANYQGNPNYRLRKDLVNALVGMHPKFLRFPGGCISEGSFIWEN
VYDWKESIGDIELRKENFNVWGYMMTMGLGYMEYFQLAEDLNAAPLPVMACGVLCQARSD
YAHPAGGALREYYIKNFTDLIDFAISVDFEHNEWAAMRKKMGHEAPFDLRYLGVGNENWG
TEFFANFEVFKTSIDEYMEKNYPGYELHIISTVGAQADDDAYQQGWKFLSGNMKGSAKVA
FADGNQVTEETVTWYEKQKDYMDTIADEHYYRSNEYLLNNVDRYNYYYRAYNADGSVNWK
ETSKVFVGEYASTDKNTLAGAVAEAAVMTGFENNADVVRLAAYAPLFNKVLTDGTYRWTP
DCIWFDDETVWFTPNYYVQQMYAQYLGDKVLATSFSTYKNGKPIDLIPQGGIEIATGNAE
VVVKRVTVTSNKDGSVLLDQDFTKELNSLWKVIPGSVGSTLEEGKGLVLKAQDSGLNGLY
ILNDSWNNYKVEVVASRLSGTDGFYVGIGLTDITTEKKNVIEYAIGYGGNATGVKVYKQG
IEGYTMGDYSSSTAAGNLRAASYEELADNTDYTITVNYGGETGNNLICSYTDGKTTSKVL
DYKLEAYNRDVFNSVTQDAEHVYVKLVNADNVDKATQLNLEDMSVESIAKLITLTGDSSL
VHVPNVNKKNDEKIVPTEQQVTLHTNSVLLQLPANSVNVLVLDLKA
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Identical sequences E3ECB4
gi|310639740|ref|YP_003944498.1| WP_013368899.1.14980 WP_013368899.1.91857 gi|386038941|ref|YP_005957895.1|

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