SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSECAP00000007430 from Equus caballus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSECAP00000007430
Domain Number 1 Region: 27-487
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 5.05e-111
Family L-arabinose binding protein-like 0.0000000086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000007430   Gene: ENSECAG00000009276   Transcript: ENSECAT00000009716
Sequence length 872
Comment pep:known_by_projection chromosome:EquCab2:16:35895959:35904241:-1 gene:ENSECAG00000009276 transcript:ENSECAT00000009716 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGSLLALLALLLLWGAVAEGPAKKVLTLDGDLVLGGLFPVHQKGGSAEECGPVNEHRGIQ
RLEAMLFALDRINSDPRLLPGVRLGAHILDSCSKDTHALEQALDFVRASLSRGADGSRHI
CPDGSYATHGDAPTAITGVIGGSYSDVSIQVANLLRLFQIPQISYASTSAKLSDKTRYDY
FARTVPPDFFQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFELEARARNICVATSEK
VGRAMNRAAFEGVVRALLQKPSARVAVLFTRSEDARELLAATQRLNASFTWVASDGWGAL
ESVVAGSEGAAEGAITIELASYPISDFASYFRSLDPWNNSRNPWFREFWEQRFRCSFRQR
DCAAHSLQAVPFEQESKIMFVVNAVYAMAHALHNMHRALCPNTTRLCDAMQPVNGRRLYK
DFVLNVKFDAPFRPADTHSEVRFDRFGDGIGRYNIFTYLRAGSGHYRYQKVGYWAEGLTL
DTSLIPWASPSAGPLPASRCSEPCLQNEVKSVQPGEVCCWLCIPCQPYEYRLDEFTCADC
GLGYWPNASLTGCFELPQEYIRWGDAWAVGPVTIACLGALATLFVLGVFVRHNATPVVKA
SGRELCYILLGGVFLCYCMTFIFIAKPSTVVCTLRRLGLGTAFSVCYSALLTKTNRIARI
FGGAREGAQRPRFISPASQVAICLALISGQLLIVATWLVVEAPGTGKETAPERREVVTLR
CNHRDASMLGSLAYNVLLIALCTLYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIF
YVTSSDYRVQTTTMCVSVSLSGSVVLGCLFAPKLHIILFQPQKNVVSHRAPTSRFGSTAA
RASSSLGQGSGSQFVPTVCNGREVVDSTTSSL
Download sequence
Identical sequences F6YQJ8
XP_005600664.1.31192 XP_008541691.1.77740 XP_008541692.1.77740 XP_014696039.1.49734 9796.ENSECAP00000007430 ENSECAP00000007430 ENSECAP00000007430

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]