SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSECAP00000008173 from Equus caballus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSECAP00000008173
Domain Number 1 Region: 162-413,473-546
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.15e-60
Family L-arabinose binding protein-like 0.0017
Further Details:      
 
Domain Number 2 Region: 74-130
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000195
Family Complement control module/SCR domain 0.0000354
Further Details:      
 
Domain Number 3 Region: 27-74
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000361
Family Complement control module/SCR domain 0.0054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000008173   Gene: ENSECAG00000009175   Transcript: ENSECAT00000010573
Sequence length 931
Comment pep:known_by_projection chromosome:EquCab2:20:28737655:28763500:-1 gene:ENSECAG00000009175 transcript:ENSECAT00000010573 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GCQIIHPPWEGGIRYRGLTRDQVKAINFLPVDYEIEYVCRGEREVVGPKVRKCLANGSWT
DMDTPSRCVRICSKSYLTLENGKVFLTGGDLPALDGARVDFRCDPDFHLVGSSRSICSQG
QWSTPKPHCQVNRTPHSGESAVRGALRELELGGWPGQACQPVEMALEDVNSRRDILPDYE
LKLHHDSKGCDPGQATKYLYELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSS
SPALSNRQRFPTFFRTHPSATLHNPTRVKLFEKWGWKKIATIQQTTEVFTSTLDDLEERV
KEAGIEITFRQSFFSDPAVPVKNLKRQDARIIVGLFYETEARKVFCEVYKERLFGKKYVW
FLIGWYADNWFKIYDPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMVRVQDFPEG
RSTRVGPRAQSRGDLEKKQSGLHSVRKALSLDQWSGGGRGLGIYISNNLKDERTSTLQLF
IGISISLFVGVSGHVVFDASGSRMAWTLIEQLQGGSYKKIGYYDSTKDDLSWSKTDKWIG
GSPPADQTLVIKTFRFLSQKLFISVSVLSSLGIVLAVVCLSFNIYNSHVRYIQNSQPNLN
NLTAVGCSLALAAVFPLGLDGYHIGRNQFPFVCQARLWLLGLGFSLGYGSMFTKIWWVHT
VFTKKEEKKEWRKTLEPWKLYATVGLLVGMDVLTLAIWQIVDPLHRTIETFAKEEPKEDI
DVSILPQLEHCSSRKMNTWLGIFYGYKGLLLLLGIFLAYETKSVSTEKINDHRAVGMAIY
NVAVLCLITAPVTMILSSQQDAAFAFASLAIVFSSYITLVVLFVPKMRRLITRGEWQSEA
QDTMKTGSSTNNNEEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPT
PPDPSGGLPRGPAEPPDRLSCDGSRVHLLYK
Download sequence
Identical sequences F6PPW6
ENSECAP00000008173

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]