SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSECAP00000009428 from Equus caballus 76_2

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSECAP00000009428
Domain Number - Region: 119-246
Classification Level Classification E-value
Superfamily SPOC domain-like 0.00667
Family Ku80 subunit middle domain 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000009428   Gene: ENSECAG00000011517   Transcript: ENSECAT00000011994
Sequence length 975
Comment pep:known_by_projection chromosome:EquCab2:6:56180821:56384757:1 gene:ENSECAG00000011517 transcript:ENSECAT00000011994 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAEEVSQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYD
SLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSR
AVVTNVQAENERLTAVVQDLKENNEMVELQRIRMKDEIREYKFREARLLQDYTELEEENI
TLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKN
EREQKNNLRKELSQYITLNDNHISISVDGLKFAEDGSEPNNDDKMNGHIHGPLVKLNGDY
RTPTLRKGESLHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGA
LTEQHERVHRLTEHVNAMRGLQSSKELKAEMDGEKGRDSGEEAHDYEVDINGLEILECKY
RVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTTKESGEKM
AHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQ
SRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSSEPVPKENTEASKEPSPTKTPTI
SPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELA
PMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMV
TETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLL
RMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKVSGEASVTVPTIDTYLLHSQ
GPQTPNIRVSSGTQRKRQFSPSLCDQSRPRTSGASYLQNLLSVPPEPTSTESFLLKGPPS
MSEFIQGHRLSKEKRLTVAPPDCQQPAASVPPQCSQLAGRQDCPTVSPDPALPEEQPHSS
SQCTPLHCLSKPPYP
Download sequence
Identical sequences F7BH10
9796.ENSECAP00000009428 ENSECAP00000009428 ENSECAP00000009428 XP_001503173.1.31192

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]