SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSECAP00000011471 from Equus caballus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSECAP00000011471
Domain Number 1 Region: 11-86
Classification Level Classification E-value
Superfamily PDZ domain-like 0.0000000378
Family PDZ domain 0.079
Further Details:      
 
Domain Number 2 Region: 94-180
Classification Level Classification E-value
Superfamily PDZ domain-like 0.00000189
Family PDZ domain 0.063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000011471   Gene: ENSECAG00000013383   Transcript: ENSECAT00000014356
Sequence length 453
Comment pep:known_by_projection chromosome:EquCab2:18:50302324:50332768:1 gene:ENSECAG00000013383 transcript:ENSECAT00000014356 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLK
ANVEKPVKMLIYSSKTLELRETSVTPSNMWGGQGLLGVSIRFCSFDGANENVWHVLEVES
NSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITP
NSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMSGPSITPLKDGFTEVQLSSVN
PPSLSPPGTTEIEQGLSGLSINSTPPAVSNVLSTGVPTVPLLPPQVNQSLISMPPLNPAT
TLPGLMPLPAGLPNLPGLPNLNLPAPHVMPGVGLPELVSPGLPPLSSLPPRNISGTAPLP
MPSEFLPSFPLVPEVSSTAGSGELLSSLPPTSSPPSNPVTTTARADTASALTVDVTPPIP
KASTTVEDRVCESAPANEKPVSAVTDANASESP
Download sequence
Identical sequences F7BBI4
XP_001498348.1.31192 ENSECAP00000011471 9796.ENSECAP00000011471 ENSECAP00000011471

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]