SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSECAP00000017782 from Equus caballus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSECAP00000017782
Domain Number 1 Region: 45-432
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 7.54e-102
Family L-arabinose binding protein-like 0.000000000000827
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000017782   Gene: ENSECAG00000020093   Transcript: ENSECAT00000021581
Sequence length 537
Comment pep:known_by_projection chromosome:EquCab2:21:31604725:31669820:-1 gene:ENSECAG00000020093 transcript:ENSECAT00000021581 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPSLLVLTLSACVLLSWALLAGSTGGGGGGGAGPGGGRREREALPPQKIEVLVLLPQDDS
YLFSLARVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAAR
GAKPDLILGPVCEYAAAPVARLAAHWDLPMLSAGALAAGFQHKDTEYSHLTRVAPAYSKM
GEMMLALFRHHQWSRAALVYSDDRLERNCYFTLEGVHEVFQEEGLHTSAYNFDETKDLDL
DDIVRYIQASERVVIMCASSDTIRGIMLAAHRHGMTSGDYAFFNIELFNSSSYGDGSWKR
GDKHDFEAKQAYSSLQTITLLRTVKPEFEKFSMEVKSSVEKQGLNEEDYVNMFVEGFHDA
ILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIAMTDT
EAGTQEVIGDYFGKEGRFEMRPNIKYPWGPLKLRIDETRIVEHTNSSPCKSSGGLEESAV
TGIVVGALLGAGLLMAFYFFRKKYRITIERRNQQEESNIGKHRELREDSIRSHFSVA
Download sequence
Identical sequences F7DBN8
ENSECAP00000017782 XP_001500448.2.31192 XP_008517058.1.77740 ENSECAP00000017782 9796.ENSECAP00000017782

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]