SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for MLOC_10655.1 from Hordeum vulgare 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  MLOC_10655.1
Domain Number 1 Region: 123-391
Classification Level Classification E-value
Superfamily vWA-like 5.04e-82
Family Trunk domain of Sec23/24 0.00000197
Further Details:      
 
Domain Number 2 Region: 4-62,408-519
Classification Level Classification E-value
Superfamily beta-sandwich domain of Sec23/24 2.62e-58
Family beta-sandwich domain of Sec23/24 0.00049
Further Details:      
 
Domain Number 3 Region: 623-762
Classification Level Classification E-value
Superfamily C-terminal, gelsolin-like domain of Sec23/24 7.59e-52
Family C-terminal, gelsolin-like domain of Sec23/24 0.0000154
Further Details:      
 
Domain Number 4 Region: 520-622
Classification Level Classification E-value
Superfamily Helical domain of Sec23/24 6.02e-43
Family Helical domain of Sec23/24 0.0000272
Further Details:      
 
Domain Number 5 Region: 45-116
Classification Level Classification E-value
Superfamily Zn-finger domain of Sec23/24 5.75e-23
Family Zn-finger domain of Sec23/24 0.00037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) MLOC_10655.1
Sequence length 762
Comment pep:novel chromosome:030312v2:5:426614560:426621545:-1 gene:MLOC_10655 transcript:MLOC_10655.1 description:"Uncharacterized protein "
Sequence
MSEFLELEALDGIRMPWNVFPGTKEDAVSCVVPVSAIYTPLKSIPDMPVVPYSPLRCRMC
RSILNPFSRVDYNAKIWLCTFCFQRNQFPQHYSSISENNLPPELFPQYTTIEYISTAETG
PVMPPVFIFVVDTCIIEEEIGYLKSALAQATELLPDNSLIGFITFGTYVQVHELGFGLLP
KSYVFKGTKEVSKEQILEQMCFFAGKQKPTTGVIAGTRDGLSSESISRFLVPASECEFVL
NSVIEELQKDPWHIPADQRASRCTGAALSVAASLLGVCVPGSGARIMAFVGGPSTEGPGS
IVSKSLAEPIRSHKDLDKDSAPLHDKAVKFYDQIAKQLVHQGHVLDLFACAVDQVGVAEM
KVAIEKTGGIVVLAESFGHSVFKDSLLRIFQSADNGLGLSFNGILEINCSKDLKIQGIIG
PCTSLEKKSPLSADTVIGQGNTSAWKMCGLDKKTSLCFVYDISRKAGPDSGAQQTGEQLY
LQFVTYYQHHEGQMRLRTTTISRTWASRSDSVQELIDGFDQEAAAAVVARLVSFKMETEA
DFDPIRWLDRALIRLCTKFGDYQKETPSSFSLSPRLSIFPQFMFNLRRSQFVQVFNNSPD
ETAYFRMMLERENVGNAVAMIQPSLLSYSFQSGPMPVLLDATAIAPDKILLLDSYFSVVI
FHGMNIAQWRNAGYQDQEGHEVFAQLLKAPHEEADTIMKERFPVPRLVVCDQYGSQARFL
LAKLNPSVAYNSDNPAPGGDVIFTDDVSFEVFMDHLQRLAVQ
Download sequence
Identical sequences M0UG52
MLOC_10655.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]