SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for MLOC_68306.1 from Hordeum vulgare 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  MLOC_68306.1
Domain Number 1 Region: 55-378
Classification Level Classification E-value
Superfamily L domain-like 8.16e-57
Family Polygalacturonase inhibiting protein PGIP 0.0012
Further Details:      
 
Domain Number 2 Region: 674-879
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 2.02e-51
Family Protein kinases, catalytic subunit 0.00073
Further Details:      
 
Domain Number 3 Region: 373-596
Classification Level Classification E-value
Superfamily L domain-like 2.47e-38
Family Polygalacturonase inhibiting protein PGIP 0.0047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) MLOC_68306.1
Sequence length 897
Comment pep:novel chromosome:030312v2:7:485988548:485992432:-1 gene:MLOC_68306 transcript:MLOC_68306.1 description:"Uncharacterized protein "
Sequence
MQTTYPLPLLLLAVLLLAGESSSQPASGDQGALLAIKKNWGNPAQLASWDPAAHADHCNW
TGIACEGAGAGPRVVTGLSLPKLKISGDVPPSVCDLANLALLDLSYNNLTGAFPGATLYR
CARLRFLDLCNNGFDGVLPDDIGLLSPVMERLNLSSNHFSGAVPAAVAGLPLLKSLILDN
NQFTGAYPAAEISKLAGLEELTLASNPFAPAPAPHEFANLTSLTYLWMSEMNMTGEIPKA
YSSLAKLQTLAMTGNKLTGEIPAWVWQHPKLEKLYLFTNGLTGELPRNITALNLMELDVS
TNKLTGEIPEDIGNLKNLIILFMYTNQLTGTIPASMATLPKLRDIRLFENKLSGELPQEL
GKHSPLGNLEVCNNNLSGRLPESLCANGSLYDIVVFNNSFSGELPKNLGDCVRLNNIMLY
NNRFSGEFPAKIWSFPKLTTLMIHNNGFTGALPAELSENISRIEMGNNRFSGSFPTSATA
LSVFKGENNQLYGELPDNMSKFANLTELSMSGNQLTGSIPASVNLLQKLNSLNLSHNRMS
GIIPPSSIGLLPSLTILDLSGNEITGVIPPDFSNLKLNELNMSSNQLTGVVPLSLQSAAY
ETSFLANHGLCARKDSGVDLPKCGSARDELSRGLIILFSMLAGIVLVGSVGIACLLFRRR
KEQQEVTDWKMTQFTNLRFTESDVLNNIREENVIGSGGSGKVYRIHLPARAAAGGGDEEH
GGGSRMVAVKKIWNGRKLDAKLDKEFESEVKVLGNIRHNNIVKLLCCISSQDVKLLVYEY
MENGSLDRWLHHLEREGAPAPLDWPTRLAIAIDSAKGLSYMHHDSAQSIVHRDVKSSNIL
LDPEFHAKIADFGLARMLVKSGELESVSAIGGTFGYMAPGEKLKFIKLPCQLVKIHY
Download sequence
Identical sequences MLOC_68306.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]