SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFCAP00000008824 from Felis catus 69

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFCAP00000008824
Domain Number 1 Region: 201-407
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 4.06e-58
Family Nuclear receptor ligand-binding domain 0.0000301
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFCAP00000008824   Gene: ENSFCAG00000009516   Transcript: ENSFCAT00000009518
Sequence length 408
Comment pep:novel genescaffold:CAT:GeneScaffold_161:38417:44369:1 gene:ENSFCAG00000009516 transcript:ENSFCAT00000009518 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
ASTRPAARMSANMAAAVPATAAASRKESPGTWGLGEEPAXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXERNIVFTSKDPECPSSPYSSSSPCGLDSIHETSARLLFMAVKWAKNLPV
FSNLPFRDQVILLEEAWSELFLLGAIQWSLPLDSCPLLAAPEASAAGSSQGRLALASAES
RVLQETISRFRALAVPEFACMKALVLFKPETRGLKDPEHVEALQDQSQVMLSQHSKAHHP
SQPVRFGKLLLLLPSLRFITSERVELLFFRKTIGNTPMEKLLCDMFKN
Download sequence
Identical sequences ENSFCAP00000008824 9685.ENSFCAP00000008824

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]