SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|203283924|ref|YP_002221657.1| from Borrelia duttonii Ly

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|203283924|ref|YP_002221657.1|
Domain Number 1 Region: 39-339
Classification Level Classification E-value
Superfamily Variable surface antigen VlsE 6.02e-66
Family Variable surface antigen VlsE 0.0000224
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|203283924|ref|YP_002221657.1|
Sequence length 356
Comment vlp protein, gamma subfamily [Borrelia duttonii Ly]
Sequence
MNKEKKGEGKVRVILLMMMMVMMGCNSGVLEAEQGKNKYLQSLVNVSNEFLNVFTSFGEM
VGSVLGLNLESKKSDVGKYFKTVQDTVEEVKTGLNKIVAEMKEEKSPNVEATESAVKTLV
ESTLDKIIAGAKEASEAIGTDDSPIGNIATAGDAAGGAAGEIDKLVKGIKSIVEVVLKDS
GKHDAGDDKKASDGSTSRTGGAAQDGEAGKLFSSANAGDQNNVKKVATDAAKAVGGVRGA
DILQAMIKNEGVAIKFAKSNDGNAGAAPKDAEVAGGIALRAMAKGGKFANGTAGNDVSAA
VKGAAVSSVSKALDILTIGIRRAIDLGLKSVKEVMKTNTGATAMASGKIGSGSQNQ
Download sequence
Identical sequences B5RN64
gi|203283924|ref|YP_002221657.1|NC_011226 gi|203283924|ref|YP_002221657.1| WP_012537767.1.78452 412419.BDU_15012

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]