SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|203288745|ref|YP_002223681.1| from Borrelia duttonii Ly

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|203288745|ref|YP_002223681.1|
Domain Number 1 Region: 46-361
Classification Level Classification E-value
Superfamily Variable surface antigen VlsE 6.02e-70
Family Variable surface antigen VlsE 0.0000929
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|203288745|ref|YP_002223681.1|
Sequence length 364
Comment vlp protein, alpha subfamily [Borrelia duttonii Ly]
Sequence
MNIEKKGEGKVRVILLMMMMVMMGCNSGGVKGEGTGGGEGRGGGSLSEVLLEVGRSAENA
FYAFMGLIADTLGFTAKSITKKSDVGEYFSILGAKLGEASAELEKVANKATSGVDKSDAL
KNPIRVAVEAAKGVLDTLKGHLESLKGIGGDDNKIVGWAESDKEGAAANTEELKKAYKAL
KGIVETATKEGVEELNEGNVQMNAVTVGVSANPEHGAKILATNDAGKPAAGDTGKAALIV
STVSGEEMLASIVKPEEKASKITGQANAQTTPLEFAVGGDGANLAQNSVKPSSLSGGIAL
RSLVKAGKLAANNNNDEKAAQAAGLTAVNKLLVAVEDIIKKTVKKTLEKAKEKIDDARKP
KIAE
Download sequence
Identical sequences B5RP87
412419.BDU_3028 WP_012539604.1.78452 gi|203288745|ref|YP_002223681.1| gi|203288745|ref|YP_002223681.1|NC_011254

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]