SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|203288787|ref|YP_002223737.1| from Borrelia duttonii Ly

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|203288787|ref|YP_002223737.1|
Domain Number 1 Region: 45-341
Classification Level Classification E-value
Superfamily Variable surface antigen VlsE 9.42e-68
Family Variable surface antigen VlsE 0.000034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|203288787|ref|YP_002223737.1|
Sequence length 357
Comment vlp protein, beta subfamily [Borrelia duttonii Ly]
Sequence
MNIEKKGEGKVRVVILMVMMIVMMMGCNSGGVSGEGKVNLEAKNSFLESLVKIGEGFQEI
FAGFGSAIGDVLGFNVVKVGDNRSKVGEHFKKVGEGLTTTKNKLNELKVKISEVKNVDGS
TIKVVEDAIKGASDVFEQLIASLTKLAGVTSASVPLGDANNGAVGADKVSVDTVIESVKE
IVEVAIDSGIKIVSGSDGGATVVNGNGPNALAGNDNAGAGDKLADEVSKADSWAMIDKIK
NAQTKNGAAAAGDAAGELATGTGAAGVTAKTNADLAAAVALKAMTKGGKFSVNNADSVKG
AAANAVNKVLVILDVLIGKTVAINLDKIRETVKALKYSETSGIEAGQSGTVQSVVTK
Download sequence
Identical sequences B5RPC8
gi|203288787|ref|YP_002223737.1| WP_012539659.1.78452 gi|203288787|ref|YP_002223737.1|NC_011256 412419.BDU_2046

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]