SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|203288818|ref|YP_002223767.1| from Borrelia duttonii Ly

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|203288818|ref|YP_002223767.1|
Domain Number 1 Region: 23-312
Classification Level Classification E-value
Superfamily Variable surface antigen VlsE 3.14e-65
Family Variable surface antigen VlsE 0.0000217
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|203288818|ref|YP_002223767.1|
Sequence length 319
Comment vlp protein, partial [Borrelia duttonii Ly]
Sequence
MVMVMMVVMGCNSGGVKDPEKVFLSDIANLGKGFLDVFVNFGDMVSDVIGIKADTKKSDI
GKYFSDIEKSMQAIKVKLREILEKNGKYEKIKTVVDKFITDKLDKITEGAKEVSNIAEGA
ELLGNMVTSDGGGAVGEVDKLIKGMKTIIDVLDLKEGNPDAGTDKKAKDGSTSRAHNSDD
AGNLFGNDKAGAAAANAKEAATDAAKAVGAITGADILKAISSGKATALANNNSAYNNVAA
VTSAKDGVVAGALALRAMAKGGKFAGNDAANDAVTIVKDAASSAVNKALSTLVIAIRSTV
DSVLKTINEAFASTLAPFR
Download sequence
Identical sequences B5RNM0
gi|203288818|ref|YP_002223767.1|NC_011257 WP_012539687.1.78452 gi|203288818|ref|YP_002223767.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]