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Domain assignment for gi|317134036|ref|YP_004089947.1| from Ruminococcus albus 7

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|317134036|ref|YP_004089947.1|
Domain Number 1 Region: 391-490
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000025
Family V set domains (antibody variable domain-like) 0.049
Further Details:      
 
Domain Number 2 Region: 112-218
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000005
Family I set domains 0.031
Further Details:      
 
Domain Number 3 Region: 205-313
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000959
Family I set domains 0.025
Further Details:      
 
Domain Number 4 Region: 298-409
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000137
Family I set domains 0.053
Further Details:      
 
Domain Number 5 Region: 45-135
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000137
Family I set domains 0.096
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|317134036|ref|YP_004089947.1|
Sequence length 1689
Comment cell wall/surface repeat protein [Ruminococcus albus 7]
Sequence
MKNYKRIITFFMAISIIGMNAVTVYGDESNSLAITENVSDGSLSIEKQPSNVTKPNGENA
TFIVVAKGDGLKYQWYYNNPNTTNGFVKSSNTTDTYSIKANINSHDKGFQVYCVVSDSFG
NSVDSDIATLTVGTPLSIVSQPQNETKQNGDTAIFKVVAKGENLKYQWYYNNPNTTNGFA
KSSNTTDTYSIKANINSHNKGFQVYCVVSDSFGNSVDSNIATLTVGTPLSIVSQPQNETK
QNGDTAIFKVVAKGEGLKYQWYYNNPNTTNGFVKSSNTTDTYSIKANINSHNKGFQVYCV
VSDSFGNSVDSDIATLTVGTPLSIVSQLQNETKQNGDTAIFKVVAKGKGLKYQWYYNNPN
TTNGFVKSSNTTDTYSIKANINSHDKGFRVYCVVSDSSGNSVQSNIATLTVASPIKLSSL
DSQTITFSEDATFTVTATGTGDLTYTWESSTDGENWTTVLDANTATLTVAGSEAIDGTQY
RCIVSDNYDQSKTSNAATLTVYNYHTITYNAGNGTFSNGSSTYTETVDPGYYYIGTGEDP
YLEGHVFLGWTYNGKYKNRILVSSDVTLTAEWEKACQVIYNANGGQFSDGNSTHTLDVDV
GTYRVDHEEPTREGYLFAGWKYKNSFVRKLNFSGETTPEFIAEWEEAIAVTYDANGGQWK
FDEDPFTTMTIYEPYGLYFPGCYEPEREGYVFDGWMLDDNYVDKIDLTEPVTFKACWKEP
ITVTYDPNGGSWDGDSTPREYDERKGDYWVSCGWPDKDGYYFIGWSTDPEAVSAETDFGY
TLTGDTKFYAVWGHDITVYYDANGGFLWDRTATDTRDVRYGDFNIEGWCPYYDGPYEFKG
WSTTKDGTVQYQPNDHVEFIQNTTLYAVWEKLPTIAYDANGGAWFNDRTQQHDLTIKMDW
DQPGFYYYVRKDEPQRPGYRFNGWVDENGKNANERELLLEKGKDYTFKASWVKIVKVKYN
ANGGQFNDWDMNEESGENAAIHYRYGDSGEYYLDGWRPEREGYEFCGWALTLDGEPVSDP
YILPDNIDEIEFYAVWAPIPIVTYDANGGGWGWNGEFYDHMTEEYEAHLGDYGVGNWWPE
REGYNFLGWSNDKNASTAESDWKITLTGSTTFYAIWEKLPTIAYDANGGAWFNDRTQQHD
LTIKMDWDQPGFYYYVRKDEPQRPGYRFNGWVDENGKYANERELQLEKGKDYVFKASWVK
IVKVKYNANGGQFNDWDMNEESGESAAIHYRYGDSGEYYLDGWRPEREGYEFSGWSLTQD
GEPAPDPYMLPDNIDEIEFYAVWNPIPIVTYDANGGGWGWNGESYDHMTEEYEAHLGDYG
VGNWWPEREGYNFLGWSTDKNASTAEHDWGTTLTGSTTFYAIWEKLVAVTFDAGQGHFYD
GYNTRIVYFEPGRRISLNWEDTPDMDGGYFEGWLLDGELVNYVRLTEDMTVEADWVYTRN
VTFFADDGYFYNGQHFWTDIYDENSYVYLRDIPEPTKAGYVFDGWMVDGEFVTGSKFTVT
EDTEFTAAWVEAENTFTVTYDAGEGFFENGENMLEIQAEGNYYVDGVPKPSRDGYVFVGW
TIDYDEGTYSMFDVNYDVTFNAVWAEPATISYDFNGGEIGMYENGEYVCYATDASHIVAV
DYYYTIGVMGPLHKDGYTFVCWNTESDGTGRSYGNFTDEIIVSEDMNLYAIWVNDSEETV
EDGSEQEWF
Download sequence
Identical sequences E6UK65
WP_013483610.1.49193 gi|317134036|ref|YP_004089947.1| gi|317134036|ref|YP_004089947.1|NC_014824

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