SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428221310|ref|YP_007105480.1| from Synechococcus sp. PCC 7502

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  gi|428221310|ref|YP_007105480.1|
Domain Number - Region: 23-132
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0408
Family Galacturonase 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|428221310|ref|YP_007105480.1|
Sequence length 179
Comment hypothetical protein Syn7502_01246 [Synechococcus sp. PCC 7502]
Sequence
MLKSFLTASALTVGTVFVAAPVHALAFNWSFTPTFGPAGANPYVVKGTISGLVIGSNPGP
GITATVTNTPTGLLEGTVFNNFNAGSGFTVDAGGNVTFASAFYSDSGFTNPLFFGGYGGF
SAALTSNVPPASWFTISGQTTFTPIAAAVPFEFNPVLGLGVLGGVLVAKKLSGKLIKKK
Download sequence
Identical sequences K9ST76
gi|428221310|ref|YP_007105480.1| WP_015168003.1.58188

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]