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Domain assignment for gi|428221859|ref|YP_007106029.1| from Synechococcus sp. PCC 7502

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|428221859|ref|YP_007106029.1|
Domain Number 1 Region: 40-216
Classification Level Classification E-value
Superfamily HD-domain/PDEase-like 1.79e-72
Family HD domain 0.0000023
Further Details:      
 
Domain Number 2 Region: 205-424
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 2.78e-63
Family RelA/SpoT domain 0.0000118
Further Details:      
 
Domain Number 3 Region: 407-478
Classification Level Classification E-value
Superfamily TGS-like 3.71e-23
Family G domain-linked domain 0.018
Further Details:      
 
Domain Number 4 Region: 664-743
Classification Level Classification E-value
Superfamily ACT-like 1.24e-17
Family AF1403 N-terminal domain-like 0.059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428221859|ref|YP_007106029.1|
Sequence length 752
Comment RelA/SpoT family (p)ppGpp synthetase [Synechococcus sp. PCC 7502]
Sequence
MITAIADLDNNSNVSDVNPESNQDWLPVWLQDCWKQIQTGEEESEDIVCQAFKLAYKLHQ
GQTRASGEPYILHPIQVANLLRDLGGGSAMIAAGFLHDVVEDTSVTLAEIEAQFGAEVRQ
LVEGVTKLSKINFNSKTERQAENFRRMFLYMAEDIRVIVVKLADRLHNMRTLEHLAPHKQ
VLIARETRDIFAPLANRLGIGQFKWELEDLAFKYLEAEQYREMKALVAETRSDREARITE
AVEILRSRIQKIGITGFEVTGRPKHLYGIYEKMHRQQKPYGEIYDIAAVRVIVNNTDECY
RILAIAHDCFRPVPGRFKDYIALPKPNGYQSLHTAVISPDGQPLEVQIRTWEMHHVAEYG
IAAHWKYKESNSNPNSNGGLNNNDSEKFNWLRQMVESQKDIKDDQEYIESLKQDLFNDEI
FVFTPKGDVHCLPRGSTPVDFAYRIHTEVGNHCAGALVNQRMVSLDRKLQNGDTVTILRQ
NNAHPSLDWINFVATSTAKNRIRLWYKRSHREENITRGRELLEKELGKTGLDTLLKSEQM
FKVVERCNYHSTDDLLAALGYGEISVNIVTNKLREQSPNPPSIKLPSQPLSPASKSPILG
VEGMVYHIAGCCHPLPGEPIIGVVTLGGNRSISIHRQDCSNFINLQSDRLIPVRWNQTDK
CDRPVTYPVDIQVEAIDRVGVLKDILSRLADHKINVRDASVKTAPGKTAFITMTIDISDR
GQFEKICSQVNKMADIVSVRRLNKAVATEAKP
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Identical sequences K9SVT9
WP_015168551.1.58188 gi|428221859|ref|YP_007106029.1|

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