SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428222952|ref|YP_007107122.1| from Synechococcus sp. PCC 7502

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428222952|ref|YP_007107122.1|
Domain Number 1 Region: 57-198
Classification Level Classification E-value
Superfamily Elongation factor Ts (EF-Ts), dimerisation domain 1.19e-45
Family Elongation factor Ts (EF-Ts), dimerisation domain 0.00002
Further Details:      
 
Domain Number 2 Region: 3-55
Classification Level Classification E-value
Superfamily UBA-like 6.53e-16
Family TS-N domain 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|428222952|ref|YP_007107122.1|
Sequence length 204
Comment translation elongation factor Ts [Synechococcus sp. PCC 7502]
Sequence
MAEITTQQVQELRAKTGAGIKDCKKALQESDGDQVKAGEYLRQKGLASAVKKASRAATEG
VIDSYIHIGNRVGVLVEVNCETDFVARREELKELAQNIAKQIAACGNVEYVSTADIPADI
VAKETEIESGKDDLGKKPAAIKEKIVQGRVEKRLKELSLLDQPYIKDQSITVDELVKQTA
SKLNENVKVSRFVRFVLGGDNQSE
Download sequence
Identical sequences K9SWH6
gi|428222952|ref|YP_007107122.1| WP_015169638.1.58188

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]