SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PBANKA_041240 from Plasmodium berghei ANKA

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PBANKA_041240
Domain Number 1 Region: 872-918
Classification Level Classification E-value
Superfamily RING/U-box 9.36e-18
Family RING finger domain, C3HC4 0.0079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PBANKA_041240
Sequence length 920
Comment PBANKA_041240 zinc finger protein, putative 2175709:2178471 reverse MW:106471
Sequence
MNYLEANLNENIEISTDDNETEINAEILRNKHINDNIINEANSTVDVSNKIYSFEQTNIK
QEIQNEFSELSEGKNENSVDINSNSICNHRDILYSPENCEGKNSQNLEESEAELLPLKME
IESNNNICNPIYDENNGNTVDSINDPSNNDKNSNNAMDCSYDHENNNTKLNDDDIYTTCN
ICLDVMEKAILNDHLYAHMLESGREPNKEHFEHRRKNVINLDAFALKDKKNNNNFSIKKK
NDIESASKCIFSHNQEYNNNSDELLNNDIDENNKLSIIYNYNSNIEELKKNINRSLGRNK
GSTNQILDSSNNNTIANDKNTSSRDINEIEKKETIMFIAPGNDTIIDNYLSLIKESFSTI
FYNPDEPSSIKSNIIDNNLYRGINKDNYKNIVNSIYSMMNCLKTSINKIKNIPDICINNI
NNDIGRYVNKAMDCIMKDINNITKKNISNINTNETIDAEVLNKKLNKIYKKLYNIYKKIN
YALQNCQNNLTNINNSSREINPSPIACNDDINGTNNRSNRSDIISNDNENNININNDRNR
EDIFSNENINRNFINSSNVHHFNHSANFYNHNSFNERRRVNDVNYLYSNLVHKYPYICEN
PLFSHFDNNSNNIWPIRRVTNTITHNMQSNSINTNTINNMNIPTINNVNNVNRVNNTSNI
DRNTWGNLANNYEPLGIIDPHMNNNILIVERAHNRHNINGYTSNNTTNRPNNNNINDIEN
YVNGYNNDRNIRTTFNRNNINVSRTTLVNNIGTTNRNNNTTNYVFNGNNNVRAVNYVIGN
SNNHNISNNTDRMHHNYLGRNIIVEQVLTINHEDNGNINTNLRVNNNILYNERVQHENIN
QNAYHSTVLKEKIDFLVVPFDTKKNKNNNLKLCSICYENYKHNEPLIFLPCTHNYHKECI
IEWINKKLTCPICKINLKSF
Download sequence
Identical sequences A0A077X772 A0A113QXX3
PBANKA_041240

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]