SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PBANKA_060730 from Plasmodium berghei ANKA

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PBANKA_060730
Domain Number 1 Region: 807-860
Classification Level Classification E-value
Superfamily RING/U-box 0.000000000932
Family RING finger domain, C3HC4 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PBANKA_060730
Sequence length 884
Comment PBANKA_060730 conserved Plasmodium protein, unknown function 3672566:3675220 reverse MW:103415
Sequence
MEGGFTDINEVGNGNGNKNENIWCKDYHIKNINGNDDNVSSTLVRCHENEYTNSNHLNNE
IPNLENPNLKNDENNNLNTDFVCDNTEKNMPPPFSSNVKPEKNNKSTLTNANNNEYQSAH
TYDPSINGDQKERVTNNRDINENSNTVLEPQNEFSNNLNEDNATCFNQRGIIENSGIENE
TPNNGVYTNETPYLRGEEEENGINSEINVEEDNMLDVNNVNNVLTINNIINDRNSRSLAS
NSEEMNYYALTIRDNIINNNMNDNLNENEVHELRFYQRCFIGKILGYEIKPNLEEFNANK
IVRAFLFLFILLGLFSIEFSLLYNNLLKINVDDAELLLIDSKYNDMFTRAFLFQFNKNKI
KNLLLTDDMIKNEINKGNYKLYNDIHRVLNKLYNNNNNKNSVNNEKKSENIYKDAIRMYE
KIKKKDVFIYTIKEFKFKMCRDIFKRINSNNSKNYLFIFMPTQNHLKITRIFIFLTIFFL
CLRVGLISSRILYEFVLFFFYRSSRLSLNTKKGYLYKYFWSLCTVMFLEIILSDDCILWW
VSDIDPIFSYHFQYFIWFCSIIYILTYGGSKLLKKWGHIRSNNSDNSSNNNIANIHSNNK
YTYTGYILEYISKFLFGMNVIFAIFFILVNLGKPTVITIIITSAVLFVDILNDSYLEQIS
LTDFHNFTQNMQPKKKIYIIENKKKKQKKIALTRVNEHTYREFTMDDILEYEEKNKSKKY
LGSTQSNINNSGGNENDGKLGYNKKKNIFNLKNIFNKRYLNGKWVYGRLSGGDSKCGEKS
FTKREDNDAISNQINGEDASIVSSFEYCEICDERPKNIVLYPCMHGGFCELCIRSLIYNT
TKLKYSLPCCPLCRKHIYDVYKISNEDKYKRVESVNILTIKSKK
Download sequence
Identical sequences A0A077XBC5 A0A0Y9V855
PBANKA_060730

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]