SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PBANKA_071590 from Plasmodium berghei ANKA

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PBANKA_071590
Domain Number 1 Region: 318-388,421-463,518-554,586-719,769-863
Classification Level Classification E-value
Superfamily Cysteine proteinases 6.48e-65
Family Ubiquitin carboxyl-terminal hydrolase, UCH 0.002
Further Details:      
 
Domain Number 2 Region: 165-282
Classification Level Classification E-value
Superfamily RING/U-box 4.71e-20
Family Zf-UBP 0.00014
Further Details:      
 
Domain Number 3 Region: 719-784
Classification Level Classification E-value
Superfamily UBA-like 0.00000000606
Family UBA domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PBANKA_071590
Sequence length 863
Comment PBANKA_071590 ubiquitin carboxyl-terminal hydrolase a, putative 4861333:4864251 reverse MW:99620
Sequence
MADIKSIISLISSTIKEPTKEDIIYLGECSITGHKDMFDDGIFIDLISFESFSLRNLKVN
CARTNNSVTMDEHRFYLNIRKKKKVLENVEEKEIKNLNINAEGGFIDNKVYEYEYDYFVY
DIKTNIYIKLSELDQNVINICNNIINHKNQIKKDNINKWINEIKESKYSKDLIQLPNIKI
KNENIECAVCKSKKNLWLNLSDGYIGCGRKIYNYGGGCLNNEEGAALKHFYETGKKYPLV
VKIGTITKDGNADVFSYADDENDSVIDPYIATHLNNLGINIMNLEKTEITTLEKEIQENK
NINFSSILDKGIEPICEQGKVGFINLGNTCYMNCALQVLLSIKGISLKYINNLDNFLLTL
DRSNKTHDDLFLQYSKLCYMAYKEDYIKNKKKYVKQFKQECQNKNIKINYDSDVDEENSV
SIDPSMFRNCVNKKGNNAFCNNNQQDIYEYLSYIINELIDNENKIFDRLLNSRTTTTTET
NKRKHGEIDNVTNKQEIDEKHANPYFPFDSDTILNIDKSIFNYFTFEIEQTIQSDIGNKS
VSSFQNIILSLDIPIDNLLLKELEKEQNECDKTTGSENIKISLMDCLKNYIKKDNINDYY
SEIENKKVQAQKDTKFKSFPPYLFIHLKRFYADENWCAKKINIPIEAHDKINLEFMRAEK
NTNLDKNTNTNNICKSENNEQNILEKYKDVVDSLLDLGFEKDKIIESIKKVKIKNVNNCI
SYIYGEDSVELDNTQSSNKNTEINQNNLDSIISMGISKEVAMASLLINKNDLQKSIDYIF
SNMDILTESKCNAIINSNKCDDGLANYELVASIVHIGNNANSGHYICYIKDNSKWYIFND
NKVGLCNGNLGKDTAYIHLYKRI
Download sequence
Identical sequences A0A077X9E2 A0A0Y9VQV1 Q4YCK5
gi|68074741|ref|XP_679287.1| PBANKA_071590 XP_679287.1.11252

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]