SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PBANKA_102860 from Plasmodium berghei ANKA

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PBANKA_102860
Domain Number 1 Region: 427-510
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000015
Family RING finger domain, C3HC4 0.015
Further Details:      
 
Weak hits

Sequence:  PBANKA_102860
Domain Number - Region: 281-312
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000272
Family Retrovirus zinc finger-like domains 0.0053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PBANKA_102860
Sequence length 678
Comment PBANKA_102860 conserved Plasmodium protein, unknown function 9263002:9265038 reverse MW:78558
Sequence
MIDTFIYWNFKGSKGSTNILRISLPCSYNTIKNKILEVANLNLQNSLDILLYHNNRVLNE
YESIYNQMFIEVQRTSISVARNLLQNSNKSYLEKNKNVNPLNNNINDRSNVYDQNVQSKV
NKYSQKYDNTTISSPISTPPINARNKPWNVYNRNSYGSIEKNNDDEDIKIQEIMESNNIY
NSGYRGQINYYKKDKMNPNLYQHKLKRMPNSSNIKKVPSFQKGISGSAYNTMNNNAYNFS
KTDNSSFFGGLNRQKQNNNEGYNKYDKNKTHHWSVNSYNNNEYPSSEANNEYIHPDYICH
MCGKKGHSIKNCTMSAFNNNKKIKVPTGIPANFLTKINAEDIYKYDQIYILKDGSYGILK
NVEEVSGSAYLYRSVDDKLNIYLGVNEKNKDENNNNNNSYTNNIQDNTNKFGSNLNPLNN
TDNDSNKISNIYKCLLCKKLYTSPITLHCCGETYCKSCIFIYNKKNKNDYYPINSKVQSI
KCPNCHKYVDTNELIINTNIKNVIDIILKKETTEDTLDKTNLDKNGKVFRENMNKTDNVL
NYNNMMDKEFLNNSNPLQSHKTFNINTKGNEYNPLTNINEIRIGNSDENYNTLSYINNNM
PGNIYSNNNNIILEKNNENNNIRFGFNPLINTPINLQELKKQHDFAIAYISKYKIEKGIK
KKRKNVDLSMLLASKKVR
Download sequence
Identical sequences A0A077YDV4 A0A113RVP3
PBANKA_102860

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]