SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PBANKA_130770 from Plasmodium berghei ANKA

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PBANKA_130770
Domain Number 1 Region: 195-228
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000000314
Family CCCH zinc finger 0.0045
Further Details:      
 
Domain Number 2 Region: 318-364
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000682
Family RING finger domain, C3HC4 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PBANKA_130770
Sequence length 384
Comment PBANKA_130770 zinc finger protein, putative 13570596:13571750 reverse MW:44960
Sequence
MFKKRNISNIKNKKKIEDIKEDKEDNENADAFKNGDEKDIVNKIWNVKEKGDDDDDDAVC
KYIFKKKLKKIDEENKLNLKKKSHKLIIQSKSENNKESNENAEDKIYKGEFNESKDYGSY
EIDKDWKNDHRAIMERNIEIGEEILKGNLKENIYRGKDAHEKALMIKKDSLAKNKYTGLY
GPVRNSGANVRVTLRIDYEPCICKDYKETGYCGFGDTCIYLHDRSDYKSGWKIEQEYEEK
RKRNEALRKEKLEKWNQKMLKKLKEKEEKINNNDAENGNNENNSDDKSSNELSVNSMSED
EHLSNASSSDDENNLPFACIKCKQKWKLEMNPSATECFHYFCEKCFMEMFQKNKKCFKCG
LQLSGIMNAAHNIIDILNKKNASK
Download sequence
Identical sequences A0A077XFN6 A0A122IND3
PBANKA_130770

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]