SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PBANKA_131410 from Plasmodium berghei ANKA

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PBANKA_131410
Domain Number 1 Region: 121-155
Classification Level Classification E-value
Superfamily RING/U-box 0.00000883
Family RING finger domain, C3HC4 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PBANKA_131410
Sequence length 1653
Comment PBANKA_131410 conserved Plasmodium protein, unknown function 13799576:13804650 reverse MW:196767
Sequence
MYINRNPNINNNKRYDALKYEDEKETFVDKPKYINVSYHIRKLFSYCDADILRIENNLII
YNSIIDNIKKNGNRLIKKEIEKIIREKEENKNYCLKDEMKEEYKINNFDLKKVELDFKFI
ECSLCFELIKIICIQECNHTYCFLCFYRLLYMQIKENNYENNDSSNNNNNNNNVTGQNAL
NNVRNNNHINSRSYSYRDRGGNLNYDESYHQNSRTNDTRKNIKNDKFNYAFDKEKMKCPF
CKERNEYIFFCLNNFYTYFTYNNLLQTLLEHDEVDMLGGYDEDNNMNESEIMVKQLKFSG
SFENDRIYDKRESINNINIEMDEQNTINKYSVDICKEIEDVEEIEKLTSKNYNDMQKEQA
NLLEKNKLKKIFSSDYDDIIILRNILKKYPNSNEDTIKNTKKGENMYLFNYYEKYIKRKK
YKTKYILNGCANSLKRYAFFSKIFVDTEKKIFYEYYYIYSLSTLLTSYVCLLTPCIDYWV
KVQNKKVEKFKLNNNNKINKYFEYIYIHNKQNLLRKKNDSIYDKYHQYTRNDHHISELES
ESTDHYFNVIDIFYKTCFTNLDNITNLKHLNKYCYNRLSDLCKHLSEHKKTYCDICVGNN
DNNFLFEYNIFLKKHVKAHIEYGEQISENKYKIRHIYCHICSYYLYDFDTYMSHINKYHF
FCKFCFNKKNPEIKGLEKNDIDDIVYYDQLHLHVYKDYDNIFAHYKKKHHPCLYEQCIFV
VFDNKMDLCLHLAEKHEERGSSKRNKIAFSIGGASYNEIRNNANNNRNNTYSYRNDYGNN
INAIQVNNEKTNSNICENEEDKNREKIDINNYKCIYDFKNFSDSWYFEYFIEIKMINFVE
YFKNKKTIFLHIIKKDLEFIENILGILTKKNADFYISNEEIINITKSVIDTDFGIEQKKN
NFFIFKIFFDGIIEKIDYLLYNKEDLEKHYLNLFFNIIIYRSFILYYSFFFMHLSEKKTT
LGKINNNTNSSKTKKNVNNSNEKREKNDSIYNYNNNKSMANLRHKFEDATKSNINELSKY
GFLYLTFLFFKIENNVLENIHSNIKGIYTLCNNTWKDIEAVNKRITLACENDTNAIDGKS
KNNDNPLIISGNKKSNNITSIKFNNEKNNTNVKGKEIVSSLFDVINSKNNLMELENIYNL
IKKCFKNKNPNNNIINHIYDQKWDICKKVSFDMLYCIEPHLNLVSFFYLFISNYLSAYQK
DSCVNKFVNISNENKKNILKKIALDVDLASLTTISKDLSNFVNARALEECLSTGPEYYRI
RKDIEFILRNRNTNNIVNNGSNHNRFSNTYRGSEKYKNIEDQKVNSNLYDISLSLRNRFL
NIIKSSKINELYYIYFYVSSIINTTNTNKNNDVNKNEDFPSLASNNINDRTSNIATISRF
SVINSNNTNLRANHTRNNNNSNLSNEDININSYKYKVENNKNKSLSSKGDALNAEYPPLP
KQKTDEDNFSFLISKNNKTKPKDSKSELSNKDISLNWKKNGSNTSKYKEKEEEKKKQKNN
KKTNNTTADHTNTNLLSLIPNKIEKSNKNEKNKAEKNATSNYYKSFNIDEFPAPADVVDQ
KKLLEQKQNSQKKKKKKKKNYENNSDSKHFYSSDDNTLSNSKSSPKKKKKNVIVPEGNIT
YTIKKNNKVKCCSMCTYENPYERKICELCENPL
Download sequence
Identical sequences A0A077XIC8
PBANKA_131410

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]