SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFCAP00000000245 from Felis catus 76_6.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFCAP00000000245
Domain Number 1 Region: 29-130
Classification Level Classification E-value
Superfamily PDZ domain-like 1.71e-19
Family PDZ domain 0.0095
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFCAP00000000245   Gene: ENSFCAG00000000267   Transcript: ENSFCAT00000000267
Sequence length 217
Comment pep:known_by_projection chromosome:Felis_catus_6.2:B4:81034158:81040511:1 gene:ENSFCAG00000000267 transcript:ENSFCAT00000000267 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
HPAELYRALAVSGGTLPRRKGSGFRWKNLSQSPEQQRKVLTLEKEENQTFGFEIQTYGLH
HREEQRVEMVTFVCRVHDSSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKASGNVL
RLETLYGTSIRKAELEARLQYLKQTLYEKWGEYRSLMVQEQRLVHGLVVKDPSIYDTLES
VRSCLYGAGLLPGSLPFVPASAKRGRGEGAGGRVRGD
Download sequence
Identical sequences ENSFCAP00000000245

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]