SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFCAP00000017087 from Felis catus 76_6.2

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSFCAP00000017087
Domain Number - Region: 342-538
Classification Level Classification E-value
Superfamily ARM repeat 0.0096
Family PBS lyase HEAT-like repeat 0.076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFCAP00000017087   Gene: ENSFCAG00000024490   Transcript: ENSFCAT00000026093
Sequence length 658
Comment pep:known_by_projection chromosome:Felis_catus_6.2:A2:17489539:17496370:-1 gene:ENSFCAG00000024490 transcript:ENSFCAT00000026093 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
QGLEQDVLQAIDRAIEAVHNAAMRDGGKYSLEQRGVLQKLIHHRKETLSRRGPSASSPAA
MTPSTSDHHLDAAAARQPNGTCRAGFERQHSLPSSEYLGADGGLYQIPPQPRRAAPAMPP
PPVKRRDREALVASGSGGRNTTPSGGSSVSSGSSVSSTSLDTLCTGSSSSELGPSCSPTP
PPVPRRGTHTTVSQAQPPPSKVPAPEPPTEEVAVDTTSAPDELEALGALNLGTTEEKVVA
ETAVPKTIGAELMELVRRNTGLSHELCRVAIGVVVGHIQASVPASSPIMEQVLLSLVEGK
DLSTALPSGQVCHDQQRLEVIFADLARRKDDAQQRSWALYEDEGVIRCYLEELLHILTDA
DPEVCKKMCKRNEFESVLALVAYYQMEHRVSLRLLLLKCFGAMCSLDAAIISTLVSSVLP
VELARDMQTDTQDHQKLCYSALILAMVFSMGEAVPYAHYEHLGTPFAQFLLSIVEDGLPL
DTTEQLPDLCMNLLLALNLHLPAPDQNVIMTALSKHSNVKIFSEKLLLLLNRGDDPVRIF
KHEPQPPHSILKFLQDVFASPATAAIFYHTDMMALIDITVRHIADLSPGDKLRVEYLSLM
HAVIRTTPYLQHRHRLPDLQATLRRILTEEEASPQGQMDRMIVREMCKEFPVLGEDPS
Download sequence
Identical sequences ENSFCAP00000017087

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]