SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Felis catus 76_6.2 > ENSFCAP00000018667

Domain assignment for ENSFCAP00000018667 from Felis catus 76_6.2

Domain architecture

Domain assignment details

(show help)
Strong hits

Sequence:  ENSFCAP00000018667
Domain Number 1 Region: 585-642
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.69e-25
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 2 Region: 389-446
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.34e-25
Family Classic zinc finger, C2H2 0.0058
Further Details:      
 
Domain Number 3 Region: 697-752
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.16e-25
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 4 Region: 68-128
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 7.19e-24
Family KRAB domain (Kruppel-associated box) 0.0011
Further Details:      
 
Domain Number 5 Region: 473-530
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.67e-23
Family Classic zinc finger, C2H2 0.0078
Further Details:      
 
Domain Number 6 Region: 529-586
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.95e-23
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 7 Region: 641-698
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.95e-23
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 8 Region: 837-894
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3e-23
Family Classic zinc finger, C2H2 0.0054
Further Details:      
 
Domain Number 9 Region: 781-838
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.31e-23
Family Classic zinc finger, C2H2 0.006
Further Details:      
 
Domain Number 10 Region: 306-362
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.81e-23
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 11 Region: 879-931
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.42e-20
Family Classic zinc finger, C2H2 0.0029
Further Details:      
 
Domain Number 12 Region: 267-319
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.68e-19
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 13 Region: 352-384
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000142
Family Classic zinc finger, C2H2 0.0056
Further Details:      
 
Domain Number 14 Region: 436-467
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000533
Family Classic zinc finger, C2H2 0.0067
Further Details:      
 
Weak hits

Sequence:  ENSFCAP00000018667
Domain Number - Region: 223-278
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000148
Family Classic zinc finger, C2H2 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFCAP00000018667   Gene: ENSFCAG00000030399   Transcript: ENSFCAT00000029790
Sequence length 955
Comment pep:known_by_projection chromosome:Felis_catus_6.2:D3:199013:229520:-1 gene:ENSFCAG00000030399 transcript:ENSFCAT00000029790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MATRVRTAAIWVPPLQEQESSCNRIREFRDQESILGPGAPRQRPRNHRTEQILEWLFISH
EQPKPTQSRGPLSFVDVFVDFTWEEWRLLDPAQKHLYRSVMLENYSHLVSLGYQDAKPDI
IFKLEQGEELWMLQAQMPSQGHPEKVLEIDDHMDWHQENQGKLESMAKNYECTAFGKLCL
LSTDYDSSGQKLHKYITHGMSFKYNIDFNSGFAGKNPNEFHVYREPFHHSKHEQTVTGIK
YCESNESGKTVNKKSPLVCQQVYMGGKPFECAFCGKAFSSKSYLAVHQRTHAEEKPYKCK
GCGKDFSSKSYLTVHQRTHTGEKLHECSECGKAFSFNSQLVIHQRIHTGENPYECCECGK
VFSRKDQLVSHQRTHSGQKPYGCNECGKAFGLKSQLIIHQRIHTGEKPFECSECQKAFNT
KSNLMVHQRTHTGEKPYGCTECGKAFTFKSQLIVHQGVHTGVKPYGCIQCGKAFSLKSQL
IVHQRSHTGMKPFVCSECGKAFRSKSYLIIHMRTHTGEKLHECGDCGKAFSFNSQLVIHQ
RIHTGESPYDCHECGKAFSRKYQLISHQRTHAGEKPYECSDCGKTFGLKSQLIIHQRTHT
GEKPFECSECSKAFNTKSNLIVHQRTHTGEKPYSCSECGKAFTFKSQLIVHQGVHTGVKP
YGCNQCGKAFSLKSQLIVHQRSHTGVKPYGCSECGKAFRSKSYLIIHMRTHTGEKPHECS
ECGKSFSFNSQLIVHQRIHTGENPYECSECGKALIGKIQLYFSSENPCRGKPYGCSDCGK
AFSSKSYLIIHMRAHSGEKPHECNQCGKAFIWKSLLIVHERTHAGESPYKCSQCEKSFSG
KLRLIVHQRMHTREKPYECSECEKAFIRKSQLIVHQRTHSGEKPYGCNECGKTFSQKSIL
SAHQRTHTGEKPCKCTECGKAFCWKSQLIMHQRTHADEKHIDELNVRNFLPKVNS
Download sequence
Identical sequences ENSFCAP00000018667

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.