SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFCAP00000023281 from Felis catus 76_6.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFCAP00000023281
Domain Number 1 Region: 42-131
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 2.75e-36
Family SCAN domain 0.0000629
Further Details:      
 
Domain Number 2 Region: 161-205
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 4.97e-19
Family KRAB domain (Kruppel-associated box) 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFCAP00000023281   Gene: ENSFCAG00000028512   Transcript: ENSFCAT00000029916
Sequence length 325
Comment pep:known_by_projection chromosome:Felis_catus_6.2:D1:66046834:66065650:1 gene:ENSFCAG00000028512 transcript:ENSFCAT00000029916 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQPLNKLMAILKPQSLTLHEQSEALKAHVSWQQESIPVMETCDSEASRQKFRHFQYLDVS
GPHEALCQLWKLCLQWLKPEVHTKQQILELLVLEQFLTILPEDIRTWVNLQHPKNSKEVV
TLIEDVIGMLKDEGKNIDEVLKNEGAFFREGVEVVLICSNSQEPISFKDVIVEFSKEEWG
QLDPAVKNLYRDVMLENYRNLNSLHQGKEHVFSKPVELSELESKDRRWIIEQEIPSTSFF
DREVISENQDSVTKERISGESSSHGEIMRRLTKSGPPSSDAWMSDDWLYRNQEHWDINLP
EEAFVHKTVSTEEGNFEGSENKKSL
Download sequence
Identical sequences ENSFCAP00000023281

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]