SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain assignment for ENSGACP00000011248 from Gasterosteus aculeatus 69_1

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  ENSGACP00000011248
Domain Number 1 Region: 133-402
Classification Level Classification E-value
Superfamily NHL repeat 7.06e-24
Family NHL repeat 0.001
Further Details:      
Domain Number 2 Region: 23-79
Classification Level Classification E-value
Superfamily RING/U-box 0.000000000283
Family RING finger domain, C3HC4 0.011
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000011248   Gene: ENSGACG00000008509   Transcript: ENSGACT00000011271
Sequence length 408
Comment pep:novel group:BROADS1:groupXX:9883924:9885147:-1 gene:ENSGACG00000008509 transcript:ENSGACT00000011271 gene_biotype:protein_coding transcript_biotype:protein_coding
Download sequence
Identical sequences G3P0X5
69293.ENSGACP00000011248 ENSGACP00000011248 ENSGACP00000011248

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]