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  Home > Genomes > Gasterosteus aculeatus 69_1 > ENSGACP00000012306

Domain assignment for ENSGACP00000012306 from Gasterosteus aculeatus 69_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSGACP00000012306
Domain Number 1 Region: 243-454
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 2.4e-60
Family Reprolysin-like 0.0011
Further Details:      
 
Domain Number 2 Region: 541-598
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000000107
Family TSP-1 type 1 repeat 0.00039
Further Details:      
 
Domain Number 3 Region: 1322-1381
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000011
Family TSP-1 type 1 repeat 0.0028
Further Details:      
 
Domain Number 4 Region: 1130-1188
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000131
Family TSP-1 type 1 repeat 0.006
Further Details:      
 
Domain Number 5 Region: 1497-1557
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000288
Family TSP-1 type 1 repeat 0.0043
Further Details:      
 
Domain Number 6 Region: 1183-1244
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000575
Family TSP-1 type 1 repeat 0.0032
Further Details:      
 
Domain Number 7 Region: 1009-1063
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000589
Family TSP-1 type 1 repeat 0.0039
Further Details:      
 
Domain Number 8 Region: 1272-1325
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000131
Family TSP-1 type 1 repeat 0.0029
Further Details:      
 
Domain Number 9 Region: 1058-1119
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000144
Family TSP-1 type 1 repeat 0.0051
Further Details:      
 
Domain Number 10 Region: 1386-1441
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000732
Family TSP-1 type 1 repeat 0.0026
Further Details:      
 
Domain Number 11 Region: 1560-1620
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000106
Family TSP-1 type 1 repeat 0.0074
Further Details:      
 
Domain Number 12 Region: 948-1009
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000109
Family TSP-1 type 1 repeat 0.0021
Further Details:      
 
Domain Number 13 Region: 1440-1497
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000811
Family TSP-1 type 1 repeat 0.0048
Further Details:      
 
Domain Number 14 Region: 833-889
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000157
Family TSP-1 type 1 repeat 0.0037
Further Details:      
 
Domain Number 15 Region: 1625-1677
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000235
Family TSP-1 type 1 repeat 0.0043
Further Details:      
 
Weak hits

Sequence:  ENSGACP00000012306
Domain Number - Region: 896-949
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0116
Family TSP-1 type 1 repeat 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000012306   Gene: ENSGACG00000009317   Transcript: ENSGACT00000012330
Sequence length 1879
Comment pep:novel group:BROADS1:groupXVII:8948722:8981993:-1 gene:ENSGACG00000009317 transcript:ENSGACT00000012330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
QEIGAYEIVTPVRVNEAGDKFPTSVHFMRKRRSLDESTGNTAEHWASPAVHYRISAFGEH
YHLNLTLDSGFIAPLYTVTVLGAARGDNVEEKEEEEDTELRHCFYKGLVNAQAEHAAVIS
LCSGLLGTFRSPEGEYFVEPLHSFQGEHYEEEHTKPHIVYRKRASTKQTTVENSACDTSG
HKHKYKKLRKRTAVSAGMFNDVESLSAGLATNALLRSESASSRPANDSSGDSGPHRRSKR
FLSYPRFVEVMLVADSKMVEHHGSNLQHYILTLMSIVSSIYKDPSVGNLINIVIVKLVII
NHESDGPDISFNAQITLKNFCIWQQSQNILDDNHQSHHDTAILITREDICRARDKCDTLG
LAELGTVCDPYRSCSISEDNGLSTAFTIAHELGHVFNMPHDDSNKCKEDGVKIQQHVMAP
TLNYNTNPWMWSKCSRKYITEFLDTGYGECLLDEPVSRPHSLSQPLPGQIYDVNKQCELI
FGQGTQVCPYMTQCRRLWCTSPEGAQRGCRTQHMPWADGTDCSPGKHCKHGLCIAKEHDA
TPVEGAWGVWSPFGTCSRTCGGGIKMAVRECNRPVPRNGGMYCVGRRMKFRSCNSEPCSK
QKKDFREEQCAAFDGRHFNINGLPPNVRWVPKYSGILMKDRCKLFCRVAGSTAYYQLRDR
VTDGTPCGPDTNDICVQGLCRQAGCDHVLNSKARRDKCGVCGGDNSSCKTVAGTFNIVHY
GYNDVVRIPSGATNIDVRQHSYSGKPEDDNYLAISNNREGFLLNGEFVVSMFKREIKVGN
VVIEYSGSDHVIERINCTDRIEEEIIVQVLSVGNLYNPDVRYSFNIPIEDKPQQFFWDVY
GPWQECSRLCQGERKRKILCSRESDRVVVSDQRCHGTARPAVITEPCNTECELRWDVARK
SECTAQCGLGYRTLEIYCAKINRADGKTQKVDDRYCSNQHKPDDKEGCHGDCNTGGWEYS
PWSECSKSCGGGTRRRGAGCRKAAEAGGDESKCSQRDKTTVQPCNEFLCPQWKTGDWSEC
LVTCGKGYKHRQTWCQFGEDRLDDRFCGSSKPESAQTCQQQECASWQVGPWRQCTTSCGP
GYQMRAVKCVVASYGAVTDTECNAATRPTDTQDCELAQCPSERAVPPHQGLKTQWRFGSW
TPCSASCGKGTRMRYVSCRDNQGGVAEESACAHLPKPPAREVCSVVACGQWKVLEWTACS
VTCGQGKTTRQVVCINFSDQEVNTSECDPDDRPPIEQDCAMSQCLSRSSESRPYPSSPNG
STRNNLPRSQSHQWRTGPWGACSSTCAGGFQRRVVVCQDENGYPANSCEDRSRPNEQRSC
ESGPCPQWIYGNWGECTKPCGGGIKTRLVVCQRPNGERFNDLSCEIHDKPPDREQCNTQP
CPSSPNWSTDPWSSCSASCGRGFKSRKVVCASGSGRPVPEENCQHLSPKPRRQKRCKGGR
CPKWKTGNWGECSASCGDGLQRREVLCPAGGRRIPPEAGCPQRSRPASSRSCRVAECPSR
RSQWREGDWRTCSKSCGAGHRRRALQCVDHNQQQVHEMYCVNQIRPPDLESCNTHSCEST
WITGEWTECSASCGQGYRQRPISCSEVPVENDNYEYGHQSLSNCQGTPPEIYMPCNLDPC
PAPQEWKVGIWGPCSVSCGDGVMERTVQCWPADGRPRNRCSRDTMPETREVCRNPNCHFP
SSCQEVQRMNGPLPDNEHFVNIQGKALKVYCAGMQTETPQEYITLTTGDGENFSEIFGFR
LNDPTQCPANDSRREDCDCRRDYTAAGFSTFSKVRLDLSKMNIITTDWRFAVTVEGKSVP
FATAGDCYSAAPCPQGRFRINLSGTGFKVAEDSSWISQGNHAVADIRKSQDGSRVSGMCG
GYCGKCAPSSGSSLPVTVE
Download sequence
Identical sequences G3P3Y3
69293.ENSGACP00000012306 ENSGACP00000012306 ENSGACP00000012306

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.