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Domain assignment for ENSGACP00000012907 from Gasterosteus aculeatus 69_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSGACP00000012907
Domain Number 1 Region: 515-638
Classification Level Classification E-value
Superfamily TIMP-like 6.54e-22
Family Tissue inhibitor of metalloproteinases, TIMP 0.093
Further Details:      
 
Domain Number 2 Region: 338-403
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000204
Family Laminin-type module 0.015
Further Details:      
 
Domain Number 3 Region: 270-326
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000023
Family Laminin-type module 0.016
Further Details:      
 
Domain Number 4 Region: 401-458
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000614
Family Laminin-type module 0.015
Further Details:      
 
Weak hits

Sequence:  ENSGACP00000012907
Domain Number - Region: 75-148
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.00421
Family APC10-like 0.084
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000012907   Gene: ENSGACG00000009779   Transcript: ENSGACT00000012931
Sequence length 639
Comment pep:novel group:BROADS1:groupXVII:9900355:9904073:-1 gene:ENSGACG00000009779 transcript:ENSGACT00000012931 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LGRGRHQMLVALCWLFLVLTRSAAGEISRCEGHACSPPIRNLATGRILFTRSSCCGNSSL
HHRTCVIPDLLCPEDPHPSAHMTDDPFLHPDTWWASAAGIGMQGEQDEIRLDLETRFCLS
HVVLVFRSPRPAAMAVERSADFGKTWEALKLFAHNCSMEFGLPDDFTQPGSLCTSRYTSA
APCSRGEVILRTLDPSSVTGLNPYSPETLARLTLTNLRIRLLKAQTCAAPLIPPKELTSP
TASALTSTSTRGSPASAPYAIYTLLARGTCLCHGHAEHCSPHNSSHDRRGGSDMVPGRCL
CTHHTAGDHCERCAPLYNDHPWRPANSSSGESNPCRKCQCHGHADSCHFSRRAWLSSGGT
SGGVCDGCRHNTVGRRCQRCRHGYHRHPALPLNSPHACTRCWCDPQGSLPTHPGEEGPWC
HPRSGQCHCKYGVGSTSCDHCLPGYWGFGEGRCKPCACPRNCDPTTGQCLHSNSNDQMFD
VPVGGRIPDLDPMVTIEEEVRWSKELAVSAMHYTGKCDCKEKKLRSVSDLCKIKHDYAIK
AIVLSAHDKGSHAEVQVNVRKVLQSGNLPLYLGTIGIYPLSWTSRGCTCPVLNPGMEYLL
AGPEEDGTGRLLVTMQSAVVPWTPRLGLLVSEGLRIGCA
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Identical sequences G3P5N4
ENSGACP00000012907 ENSGACP00000012907 69293.ENSGACP00000012907

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