SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGACP00000019946 from Gasterosteus aculeatus 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGACP00000019946
Domain Number 1 Region: 248-402
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 9.92e-50
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.00000637
Further Details:      
 
Domain Number 2 Region: 122-238
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.53e-34
Family Spermadhesin, CUB domain 0.0000243
Further Details:      
 
Domain Number 3 Region: 10-115
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 6.41e-32
Family Spermadhesin, CUB domain 0.00025
Further Details:      
 
Domain Number 4 Region: 611-764
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.06e-28
Family MAM domain 0.0037
Further Details:      
 
Domain Number 5 Region: 490-569
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 9.92e-19
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.0003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000019946   Gene: ENSGACG00000015122   Transcript: ENSGACT00000019984
Sequence length 889
Comment pep:novel group:BROADS1:groupI:25422974:25461236:1 gene:ENSGACG00000015122 transcript:ENSGACT00000019984 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CGGLFDASKAGYITSPGYPLEYPPHQNCHWIVTAPEPSQRIVLNFNPHFEIERLDCKYDF
IEIRDGTSENADVLGRHCSNIAPAPIISSGPSLQIRFVSDYAHQGAGFSLRYEIFKTGSE
FCFRNFTSSSGMIESPGFPDKYPHNLECSYMIIAPPHMDITLTFLTFDLENDPLLVGEGD
CKYDWLDVWDGLPQVSPLIGRYCGTKIPPEIQSSSGLLSLSFHTDMAVAKDGFSARYNMT
HKQVSDSFHCSMVLGMETGKISDDQISASTTFYDNRWLPRQARLNNDDNAWTPSEDSNKE
YIQVDLHFLKVLTGISTQGAISKETQKSYYVTTFKLEVSTNGEDWMVYRHGKNHKIFHAN
TDPAEVVLNRVPQPVLARFVRIRPQTWKNGIALRFELYGCQITALFCLEKVDFAGIKPSR
SSTEQKEQQFSATPLVLLQRHFRSLNICEKISFQINHSWLLVHSHTRNCDSAQPLQGARG
GDAGSGATTDNRAFVRKYKVAHSLNGKEWNFIMDFKTSLPKIFEGNTHFDTPELRHFDEI
VSQYIRLYPERWSPAGIGMRVEILGCDIPETSTPAETTTPTLPPDMDTSTAPLTTTGGSR
QQVAASPSPESACDFDHGLCGWTHDPNAPVLWSLHSHAAPSSASHAALSERMKIYLYLDA
SLKTEQQRARLVSPVVVADTGPLCLLFSYQLWGEAQGHLKVLLRDAHNEETVLWTLKDDQ
GPVWREGRTILPRSPKDFQIVVEGFFVHGTRGHIWIDNIYLSSSIPLKECTPPLRRFSKQ
SFSRSVKGNYLTGCFPSRGGVPVPPLPIHWYYIMAVGGALLLLAVAILVRALCCCRQHLA
TKKSQLSVAYHSSSQCFQYSNWSSSMAAPGVEPVLTVRLDSRDRHRTLC
Download sequence
Identical sequences G3PQR1
69293.ENSGACP00000019946 ENSGACP00000019946 ENSGACP00000019946

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]