SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGACP00000020024 from Gasterosteus aculeatus 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGACP00000020024
Domain Number 1 Region: 181-318
Classification Level Classification E-value
Superfamily C-type lectin-like 5.25e-32
Family C-type lectin domain 0.0017
Further Details:      
 
Domain Number 2 Region: 780-911
Classification Level Classification E-value
Superfamily C-type lectin-like 3.37e-30
Family C-type lectin domain 0.00087
Further Details:      
 
Domain Number 3 Region: 326-464
Classification Level Classification E-value
Superfamily C-type lectin-like 3.71e-30
Family C-type lectin domain 0.00097
Further Details:      
 
Domain Number 4 Region: 630-766
Classification Level Classification E-value
Superfamily C-type lectin-like 2.7e-28
Family C-type lectin domain 0.00096
Further Details:      
 
Domain Number 5 Region: 475-610
Classification Level Classification E-value
Superfamily C-type lectin-like 9.62e-27
Family C-type lectin domain 0.001
Further Details:      
 
Domain Number 6 Region: 2-125
Classification Level Classification E-value
Superfamily Ricin B-like lectins 2.93e-21
Family Cysteine rich domain 0.024
Further Details:      
 
Domain Number 7 Region: 125-183
Classification Level Classification E-value
Superfamily Kringle-like 4.85e-20
Family Fibronectin type II module 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000020024   Gene: ENSGACG00000015183   Transcript: ENSGACT00000020062
Sequence length 936
Comment pep:novel group:BROADS1:groupII:6321459:6331013:1 gene:ENSGACG00000015183 transcript:ENSGACT00000020062 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
KGVFILESEPLKRCVTVDRSNLVLEDCERPTRRMLWKWVSRHRLFNLGTSSCLGLNVSDT
TQPLGTFECDTALPVLWWRCSGNGLYGASHWKVSVAGRLVVVKKNSYHGWKRYNTPGEGP
CSYPYEDVHTLLGNAHGMPCSLPFKYNNKWYSECTTEGREDHLPWCSTTTRYDEAEKWGF
CPVHDSSCDHFWESNQELRACYQFNLHTILTWSQALLTCQAQGGNLLSVTSLAEQRYIRD
RLSSVGAMVWIGLNHLKDGRGWQWSDGAPLSLVNLLTALPASPLQDNRQCGVYNYEGIWH
GASCESARPYICKKTPNDTRRAEPLENWQYVRTECADGWWPHNGVCYRLLADTETGTWGE
ASDACRSRGANLTSVHSLSEVEMLLKLLTNLSGESGEVWIGLWKPPLSPSVVWSDGSPVT
LTFWHQYHPPHNMTDAALCVKADRKEGNWLFAACDERLPAVCSRESQKAARQPGAPDEEC
PEGWKRHGHSCYTVTSHEQSYEDARMGYYCTAPLLTVENRFEQAFVNSLLSERGADGSRY
YWIGLMDVERRGEYSWLLPNSSSRPLTFTNWNKHQPVSSGGCVAMSGGSALGHWEVKDCK
LHKASSVCKQSISSYHDVQSPEHHIDSSAPCPPGWESHSGMLYCFKVFHNEKVLMKRSWV
EADFFCQALGAQLASFYHYEEQVFVKQLLSTMFDGTEGRWFWVGLNKRDPEYPGAWEWSD
GSPVVTSFIEDKNEEDDRRDCAVYSDLTNAIMPLPCDTQHEWICKLSRGDQLKKPYWYTE
QSEPWVFYRGAEYLLAKQPFDWDAVSLACQMMGAHLLSIHSREEMHFLKERLQRLSPGPT
DWWIGLSVGQTGDDASWSDRTRVDFENWAERSAAGGPRRDNVCVTMSSKSGKWSASKCSD
RHGYVCKRKTVSVVEAPREPHYIGGCPEQWLYFGHK
Download sequence
Identical sequences G3PQY9
ENSGACP00000020024 ENSGACP00000020024 69293.ENSGACP00000020024

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]