SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGACP00000005080 from Gasterosteus aculeatus 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGACP00000005080
Domain Number 1 Region: 172-241
Classification Level Classification E-value
Superfamily Homeodomain-like 5.99e-18
Family Homeodomain 0.0000577
Further Details:      
 
Domain Number 2 Region: 44-111
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000000000793
Family LIM domain 0.03
Further Details:      
 
Domain Number 3 Region: 14-42
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000117
Family LIM domain 0.022
Further Details:      
 
Weak hits

Sequence:  ENSGACP00000005080
Domain Number - Region: 108-135
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00104
Family LIM domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000005080   Gene: ENSGACG00000003872   Transcript: ENSGACT00000005095
Sequence length 351
Comment pep:novel group:BROADS1:groupXIII:1324225:1328271:-1 gene:ENSGACG00000003872 transcript:ENSGACT00000005095 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGDMGDPPKKKRLISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFV
RDGKTYCKRDYISRLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDE
FALREDGLFCRADHDVVERASLGSGGDPLSPLHPSRPLQMAAEPISARQPALRPHVHKQP
EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK
RSILMKQLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA
LQSDIDQPAFQQLVSFSEGGPGSNSTGSEVASMSSQLPDTPNSMVSSPIEA
Download sequence
Identical sequences G3NIC0
ENSGACP00000005080 69293.ENSGACP00000005080 ENSGACP00000005080

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]