SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGACP00000006196 from Gasterosteus aculeatus 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGACP00000006196
Domain Number 1 Region: 2-111
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 1.56e-21
Family alpha-D-mannose-specific plant lectins 0.00075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000006196   Gene: ENSGACG00000004703   Transcript: ENSGACT00000006213
Sequence length 116
Comment pep:novel group:BROADS1:groupXXI:10062694:10063140:-1 gene:ENSGACG00000004703 transcript:ENSGACT00000006213 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSKNYLSKNDELRKGDFLISNNRQWKAIFQEDGNFVIYGWKPFWASDTSGSDGMRVCMQE
DCNLVMYNKCDQPKWHTNSYRPTSKMCRLHLTDEGKLVVSRESEELWNSDKDHGKK
Download sequence
Identical sequences G3NLI3
ENSGACP00000006196 ENSGACP00000006196 69293.ENSGACP00000006196

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]