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Domain assignment for ENSCPOP00000000217 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000000217
Domain Number 1 Region: 247-464
Classification Level Classification E-value
Superfamily SMAD/FHA domain 4.97e-69
Family Interferon regulatory factor 3 (IRF3), transactivation domain 0.00032
Further Details:      
 
Domain Number 2 Region: 13-122
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 2.9e-38
Family Interferon regulatory factor 0.00012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000000217   Gene: ENSCPOG00000000246   Transcript: ENSCPOT00000000249
Sequence length 498
Comment pep:known scaffold:cavPor3:scaffold_11:49392712:49396703:1 gene:ENSCPOG00000000246 transcript:ENSCPOT00000000249 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNQPPPRAPPQPRRVRLKPWLVAQVNSCQYPGLQWVNGERKFFYIPWRHATRHGPSQNGD
NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
CSNGPTPTESQPTEEDYTVVCGKGSGRGQGLLQKMLPGLSLTEAVQPGPSMAPYLPKEDV
KWPPVLPPPVGPPTLDSSLLVAASGNPAGFGQRLPEVLPSPEPLAQALPTANEQLLPDLL
ISPHMLPLTDLEIKFQYRGRPPHALTISNPQGCRIFYSQLEATQEQVELFGPVSLEQVRF
PSPEEIPSEKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASTHGSSPN
PIQREVKTKLFSLEQFLNDLILFQKGRTDTPPPIEIFFCFGEEWPDQKPREKKLITVQVV
PVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQAQQLQSVAHATPM
VGLGTGQGPWPMHPVGMQ
Download sequence
Identical sequences ENSCPOP00000000217 ENSCPOP00000000217 10141.ENSCPOP00000000217

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