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Domain assignment for ENSCPOP00000004540 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000004540
Domain Number 1 Region: 5-63
Classification Level Classification E-value
Superfamily HMG-box 0.00000000432
Family HMG-box 0.0051
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000004540
Domain Number - Region: 167-256
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 0.00356
Family Calponin-homology domain, CH-domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000004540   Gene: ENSCPOG00000005046   Transcript: ENSCPOT00000005100
Sequence length 411
Comment pep:known scaffold:cavPor3:scaffold_39:4190777:4220306:1 gene:ENSCPOG00000005046 transcript:ENSCPOT00000005100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPNRRASRNAYYFFVQERMPELRRRGLPVTRVADAIPHCSAEWALLREEEKEKYSEMARE
WRAAQGKESGSSEMQKLASTPLRRPGMFIPKPSVLPPDMSSLSLKSDQALLGGVFYFLNI
YSHGELPPHCEQRFLPCEIGCVRYSLQEGIMAVFHSFINPGEIPRGFRFHCQAASDSSHK
IPISNFEFGHDQATVLQNLYKFIHPNPGNWPPVYCKSDDRARVNWCLKRMARELEISQDI
ELLTVEDLVIGIYQEKFLKEPSKTWVRSLLDVAMWDYSSNTRCKWHEENDILFCALAVCK
KIAYCISNSLATLFGIQLTGAHVPLQDYEASNSVTPKMVVLDAGRYQNQRVESPRFPHFS
CSNQEQRLNTSCGDYPPGVKIPGPNSRVRGRGITRLLESISSSSSSIHKFS
Download sequence
Identical sequences ENSCPOP00000004540 ENSCPOP00000004540 10141.ENSCPOP00000004540

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