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Domain assignment for ENSCPOP00000005862 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000005862
Domain Number 1 Region: 162-664
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.71e-79
Family RNA helicase 0.066
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000005862
Domain Number - Region: 1114-1140
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0611
Family Classic zinc finger, C2H2 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000005862   Gene: ENSCPOG00000006510   Transcript: ENSCPOT00000006575
Sequence length 1141
Comment pep:known scaffold:cavPor3:scaffold_80:7223713:7237488:1 gene:ENSCPOG00000006510 transcript:ENSCPOT00000006575 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAPPRPREGRGHRDHRWAPSEEEALEKWDWDCPETRRRFEDAFFRDEDYIRQGSEDCHKF
WAFFERLQRFQTLKTSKKEETDPGHPKHCVPALADLPRPYDSRYRINLSVLGPDMRDIRG
SGSQLPPKRVSEFRRALLHYLDFSQKQAFTRLAKLQRDRAALPIAQYRKCILQTLKQHQV
VVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQI
RFESTRSAATKIVFLTVGLLLRQIQREPSLPQYKVLIVDEVHERQLHNDFLLGVLQHLLP
TRPDLKVVLMSATINIMLFSSYFGNAPVVQVPGRLFPITVIYQPQEAEQTASKSERLDPR
PFLRVLEAIDNKYPAEERGDLLVFLSGMAEIGAVLEAAQTYASHTQRWVVLPLHSALSVA
DQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWI
SQASAEQRKGRAGRTGPGVCYRLYAESDYDAFTPYPVPEIRRVALDALVLQMKSMSVGDP
RTFPFIEPPPPASLETAIQYLQEQGALDASEALTPIGCLLAQLPVDVVIGKMLILGSMFS
LAEPVLTIAAALSVQSPFPRSAQSSLECAAARQPLDSDQGDPFTLFNVFNAWVQVKAERS
QNSRKWCRRRGVEEHRLYEMANLRRQFKDLLEDHGLLAGAEAATPGDSYSRLQQRRERRA
LHQLKRQHEEGAGRRRKVLRLQEEAEDGSSDEDHAGPAARHAEDSVDIQDVKFKLRHNLE
QLQAAASSAQALSREQLVLLKLVLARGLYPQLAVPDPFNSGRKDSDQIFHTQAKQGAVLH
PTSVFASSPELLHVQEPQATCGGGSRDDKDKMSSKHQLLTFVSLLETNKLYLVNCVRVPA
LQSLLLFSRSLDTNGDCSRLVADSWLELQVVDSEGAVQLLAAALRLRACWESALDRQLSH
QGEEDEDEEEAESVSRAEVAALSRELLQFMATKVPYSLRRLTGLEAQNLYVGPQTVTATP
KLPGLFGSSALSPHPTKGGYRVTNFLTYNCLLSDTDLYSDCLRTFWTCPRCDLHLPLTPL
ERMAHESACATDLHGGPGAEEATTEQSRKPSALQRPYHCDSCQKDFLFTPTEALRHRRQH
M
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Identical sequences ENSCPOP00000005862 10141.ENSCPOP00000005862 ENSCPOP00000005862

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