SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCPOP00000006047 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCPOP00000006047
Domain Number 1 Region: 115-182
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000523
Family VWC domain 0.039
Further Details:      
 
Domain Number 2 Region: 259-326
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000000349
Family VWC domain 0.009
Further Details:      
 
Domain Number 3 Region: 36-103
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000837
Family VWC domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000006047   Gene: ENSCPOG00000006712   Transcript: ENSCPOT00000006780
Sequence length 459
Comment pep:known scaffold:cavPor3:scaffold_46:10086793:10195574:1 gene:ENSCPOG00000006712 transcript:ENSCPOT00000006780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRKKWKMGGMKYIFSLLFFFLFLEGSKAEQVKHSETYCMFQDKKYRVGERWHPYLEPYGL
VYCVNCICSENGNVLCSRVRCPNLHCLSPVHVPHLCCPRCPEDSLPAVNNKMTSKSCEYN
GTTYQHGELFVAEGLFQNRQPNQCTQCSCSEGNVYCGLKTCPKLTCAFPVSVPDSCCRVC
RGDGELSWEHSDGDIFRQPANREARHSYHRSHYDPPPNRQAGGLPRFPGARSHRGALMDS
QQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQECK
KIHCPSRYPCKYPQKIDGKCCKVCPGKKAKEELPGQTFDNKGYFCGEETMPVYESVFMED
GETTRKIALETERPPQVEVHVWTIRKGILQHFHIEKISKRMFEELPHFKLVTRTTLSQWK
IFTEGEAQISQMCSSRVCRTELEDLVKVLYLERSEKGQC
Download sequence
Identical sequences H0V8E9
10141.ENSCPOP00000006047 ENSCPOP00000006047 ENSCPOP00000006047 XP_005002760.1.53824 XP_013005649.1.53824 XP_013005650.1.53824

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]