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  Home > Genomes > Cavia porcellus 69_3 > ENSCPOP00000011550

Domain assignment for ENSCPOP00000011550 from Cavia porcellus 69_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000011550
Domain Number 1 Region: 471-628
Classification Level Classification E-value
Superfamily Growth factor receptor domain 2.47e-29
Family Growth factor receptor domain 0.00055
Further Details:      
 
Domain Number 2 Region: 613-780
Classification Level Classification E-value
Superfamily Growth factor receptor domain 1.75e-28
Family Growth factor receptor domain 0.00022
Further Details:      
 
Domain Number 3 Region: 2529-2652
Classification Level Classification E-value
Superfamily CalX-like 3.4e-25
Family CalX-beta domain 0.00083
Further Details:      
 
Domain Number 4 Region: 918-1059
Classification Level Classification E-value
Superfamily Growth factor receptor domain 4.03e-25
Family Growth factor receptor domain 0.0016
Further Details:      
 
Domain Number 5 Region: 2899-3028
Classification Level Classification E-value
Superfamily CalX-like 1.11e-23
Family CalX-beta domain 0.0014
Further Details:      
 
Domain Number 6 Region: 768-925
Classification Level Classification E-value
Superfamily Growth factor receptor domain 3.5e-22
Family Growth factor receptor domain 0.0017
Further Details:      
 
Domain Number 7 Region: 2777-2892
Classification Level Classification E-value
Superfamily CalX-like 3.79e-21
Family CalX-beta domain 0.0014
Further Details:      
 
Domain Number 8 Region: 3018-3166
Classification Level Classification E-value
Superfamily CalX-like 4.45e-21
Family CalX-beta domain 0.0016
Further Details:      
 
Domain Number 9 Region: 385-488
Classification Level Classification E-value
Superfamily Growth factor receptor domain 4.28e-18
Family Growth factor receptor domain 0.001
Further Details:      
 
Domain Number 10 Region: 2652-2777
Classification Level Classification E-value
Superfamily CalX-like 5.89e-18
Family CalX-beta domain 0.0016
Further Details:      
 
Domain Number 11 Region: 110-181
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000000023
Family VWC domain 0.028
Further Details:      
 
Domain Number 12 Region: 45-118
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000586
Family VWC domain 0.014
Further Details:      
 
Domain Number 13 Region: 184-244
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000816
Family VWC domain 0.06
Further Details:      
 
Domain Number 14 Region: 237-308
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000209
Family VWC domain 0.014
Further Details:      
 
Domain Number 15 Region: 331-385
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000732
Family VWC domain 0.015
Further Details:      
 
Domain Number 16 Region: 3-53
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000178
Family VWC domain 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000011550   Gene: ENSCPOG00000012831   Transcript: ENSCPOT00000012956
Sequence length 3996
Comment pep:novel scaffold:cavPor3:scaffold_5:2374460:2625453:1 gene:ENSCPOG00000012831 transcript:ENSCPOT00000012956 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
DATIWKPDSCQNCHCHGDIVLCEAVVCRNPQCAFEKGEVLQIAANQCCPECVSRTPGSCY
HQEKIHEHGTEWGSPPCQVCSCAHGEVRCTPRPCPPRSCGQQELEFTPEGSCCPVCVGPG
KPCFHEGRVYQDGEDWQLSRCAKCMCRDGVTQCFAAQCQPLFCNQDEAVVRVPGKCCPQC
SPPSCSAAGHVYQHGEQWHQDSCTTCSCNRGKIRCHKQACPPLRCQKGQSRVRRPMQCCE
ECVSPAGSCSSNGIVHYQHDMWKGSPCEFCMCHRGQVTCQPPGCEEQACRNGEELIHLDG
KCCPECISRNRYCVYERKAEFISSNVSEIKHIPEGEKWEDGPCKVCECQSAQVTCYEPSC
TPCPVSTLALVERGQCCPHCTSVHCHPDCLTCSHSPNHCDLCQDPTKLLENGRCVHSCGL
AFYQAGSLCLACQPQCSTCTNGLECSSCRPPLLMQQGQCVTTCGDGFYQDRNSCAACHVS
CAGCSGPTEKHCRACRDPLKVLRHGSCENSCGDGFYDKQGTCMACDQSCKSCGPNSPRCL
TCIENMVLHNGQCISECPGGYYADATTRCKVCHNSCASCTGPSSSHCTACAHPKVLQQGY
CLSSCGEGFYADHGVCTACHATCQACVGPEPSHCTECKNPEAGLQVGQLLATVPSGECLP
RCRAQFYLESTGLCEACHQSCLGCTGKNSHDCIACQPSHVLLDGQCLSQCPEGYFNQAGS
CTECHPACRQCHGPLESDCTSCHPHVALTSGNCKTSCKAEKFLNLAGYCIDCHPLCQHCT
ANLQDTGSICLRCQNAHHLLLGDHCVPHCPSGYYTERSTCKRCHSSCRTCRAGGPFSCSS
CNTNLVLTHIGTCSASCFPGHYLDDNRACQPCNPRCRSCVSHASCTSCRDPHKVLLFGEC
QYENCAPQYYLNVSTNTCRECDWSCSECSGPLRTDCLQCMDGYVLQDGACQEQCSPAFYR
DLGVCKSCDNHCLQCQDLHQCTHCEEPFLLLGAQCVQECGKGYFPDHAKHKCTVCPQGCL
QCSSRDWCHLCDQGFFLRNGLCVARCVLGFSAHSSNETCAGKTHTPSLHVNGSLTLAIGS
MKPLDFSLLNIQPQDGTVEDLLFHVVSTPTNGRLVLSRNGKEAQLDKAGHFSWKDVSQKK
VRFVHSKEKLRKGYFSLKISDQQFFSEPQLINIQAFSTQAPYVLRNEDLHISHGEQGTIT
TQILDIRDDDNPQDVVVEVLDSPHHGKLFQTLRSPAASISQFRLDELARGLLLYAHDGSD
STADVIVFQASDGHSFRNILFHVAIGSKNDGALQLVANSMVWVPEGGMLQITNRILQAEA
PGASPDDIVYNITEGHPQFGEVVLLVNLPVDSPGDEGQHLPDGRTATPTNSFTQQDVNDG
VVWYRHSGAPAQSDSFRFQVSRTTDTQTHLESHLFNIAILPQTPEAPQFSLATSLHMTAR
EDGLTVIQPHSLSFVNSKRPSGKMVYNITLPLHPNQGKVLEHRDRPLSPIRYFTQEDVNQ
GKIVYRPPSALPHLREITAFSFAGLPESVKFHFTVSDGEHTSPEMTFTIHLLPTVQQPPA
PQVTAPLLEISRGGRASLGLQVVVRDTQAVPGELFFVLRKPPRHGVLLKDAAGSPGPMLA
GDTFTYDDVEKNALQYVHDGSSAQEDSLEISVTDGLTVTVFQVRVEVSLSEDPWPRLAAG
SSLSMTVSSHSTTTITRSHLAYVDDSSPDPEIWIQLSSLPMYGALLRASGSEVEELSEVA
NFTMEDINNKNIRYSAGFETVSHPVTDSFHFSVSDMDHNRLDNQIFTITITPVENPPPVI
GFADLITVDEGGRAPLSFHHFFATDDHDNVQEDAIIKLSALPKYGCIENTGTGDRFGPGT
TSNPEASFPIQDVLENYIYYFQSVHESIEPTHDIFSFYVSDGTSRSEIHSINITIERKND
EPPRMTVRPLGVKLSLAVVISNSSLSLRDLDTPDNELVFVLTKKPDHGHLLQRLTSSDPL
ENGTVLSQGSSFTYQDVLAGLVGYMPGDSGVAVDDFQFSLTDGLHVDTGRMEIYIGLPIS
DSPRLTVNRGLQLSAGSTGSAARITEQHLKAADTSSGPRQVMYVVREDPSAGRLQMVTPD
SLQQISVHGPVRGFTQADISQGHVEYSHRTGEPGGNFAFKFDVVDVEGNRLMDQSFSIDV
LEGKSPPVIITNKGLVLDENSTTLQLSATDQDGEPAELIYRVTRQPQLGHLEHAASPGNL
ERSSATGSHAAPFHITYIYSSRGVWRQSEELFFLLACGLHISLNKHVTFAFLKHNHNIRD
GSLITETRLCAHKTYNSGVQKLNCHAILKXIRSSVTLDREANAITFRVVQPPRHGMIERT
SRGQHTRLATSFTMEDIYQNRVSYSHDGSNSLKDRFTFTVSDGTNPFFIIEEGGKEITTA
APQQFRVDVLPVDDGTPMIVTNLGLQWLEYMDGKATNLITKKELLTMDPDTDDPQLVYEI
TSGPRHGHVENKLQPGRAATSFSQEEVNLGLIRYVLHEEKIHEMMDSFQFVVKDSKPNVV
GDNIFHIQWSLISFKYTSYNVSEKAGSVSVTVQRTGNLNQYAIVLCRTEQGTASSSSGLG
VSAHPGQQDYVEYAGQVQFDEREDTKSCTIVINDDDVFENTESFTVELSMPAYALLGEFT
KAKVIINDTEDEPTLEFDKKTYRVNESAGFLFAPVERKGDSSSTVSAVCYTVPKSAMGSS
LYALESGSDFKSRGMSAESRVILRPGVTRSTCDVMLIDDSEYEEEEEFEIALADASDNAR
IGRVATARVLINGPNDASTVSLGNTAFTVSEDAGTVRIPVIRHGTDLSTFTSVWCATRPS
DPASATPGVDYVPSSRKVEFGPGVTEQYCTLTILDDTQYPVIEGLETFVVFLSSAQGAEL
SKPSQAVIAINDTFQDAVPSMQFAKDLLLMKEKEGVLHVPIIRSGDLSYESSVRCYTQSH
SARVAEDFKERRNADSSRITFLKGEKVKNCTVYVHDDSMFEPEEQFRVHLGHPLGNHWSG
ARVGKNSMATITITNDEDAPTIEFEEAAYQVREPPGPDATAILNIKVIRRGDQNRTSKVR
CSTRDGSAQSGVDYYPKSRVLKFNPVFGKGVDHIYFKVEILSNEDREWHESFSLVLGPDD
PVEAVLGDVTTATVTILDQEATGSLILPAPPIVVTLADYDHVEEVTKEGAKKAPSPGYPL
VCVTPCDPHFPRFAIMKEHCGEAGINQTSVQFSWEVAAPTDGNGARSPFETVTDSTPFTS
VNHMVLDSIYFSRRFHVRCVAKAVDKVGHVGTPLRSNIVTIGTDSAICHTPVVAGTSRGF
QAQSFIATLKYLDVKHKEHPNRIHISVQIPHQDGMLPLISTMPLHNLHFLLSESIYRHQH
VCSNLVTTRDLRGISEAGFLDDVVYDSTALGPGYDRPFQFDPNVRELKTIQLYKHLNLKS
CVWTFDAYYDMTELIDVCGGSVTADFQVRDSAQSFLTVHVPLYVSYIYVTAPRGWASLEH
HTEMEFSFFYDTVLWRTGIQTDSVLSARLQIIRIYIREDGRLVIEFKTHAKFRGQFVMEH
HTLPDVKSFILTPDHLGGIEFDLQLLWSAQTFDSPYQLWRATSSYNRKDYSGEYTIYLIP
CTAQPTQRWADPGEKPLACTAHAPERFLIPIAFQQTNRPVPVVYSLNTEFQLYNNEKVFL
MDPNTSDMSLAEMDYKGAFSKGQILYGRVLWNPEQNLNSAYKLQLEKVYLCTGKDGYVPF
FDPTGTIYNEGPQYGCIQPNKHLKHRFLLLDRSQPEVTDKYFHDVPFEAHFASELPDFHV
VSSMPGMDGFTLKVDALYKVEAGHQWYLQVIYIIGPDTISGPRVQRSLTSPLRRYQRDLV
DPSGQLTLDESLIYDNEGDQVKNGTNMKSLNLEMQEPIIAASLSQTGASVGSALAAIMLL
LLIFLVACFITRKCQKQRKKQPREDILEEYPLNTKVDMPKRTTDRVEKNVNRQYCTVRNV
NILSDTEGAYTFKGAKVKKLNLEVRVHNNLQDGTEV
Download sequence
Identical sequences 10141.ENSCPOP00000011550 ENSCPOP00000011550 ENSCPOP00000011550

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.