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Domain assignment for ENSCPOP00000016271 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  ENSCPOP00000016271
Domain Number - Region: 655-728
Classification Level Classification E-value
Superfamily FnI-like domain 0.000701
Family Fibronectin type I module 0.023
Further Details:      
 
Domain Number - Region: 597-660
Classification Level Classification E-value
Superfamily FnI-like domain 0.00429
Family VWC domain 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000016271   Gene: ENSCPOG00000023104   Transcript: ENSCPOT00000023763
Sequence length 816
Comment pep:novel scaffold:cavPor3:scaffold_9:59194301:59224725:-1 gene:ENSCPOG00000023104 transcript:ENSCPOT00000023763 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
EALCSPAGTSGTSRASSPGTSRSPGTSASPAPRVHNATSSAGTSGTSGASSPVVTRSTGT
SGPTEANPTTSSVPGTTAGPGTSSAASTASTAPPATTSAATPTGTSGTSRASSPGTSRSP
GTSASPAPRVHNATSSAAISRVGAARAGSPRTPSPAANLLSLAATTAAPGTPSTASPPST
AAPGTPSAPTPTGTGPPLWRRSAQPESLAGQGTPSRGQISVESGPRALPTPKRRPAARAS
QPGGTSGTSGASSPVVTRSTGTSGPTEANPTTSSVPGTTAGPGTSSAASTASTAPPATTS
AATPTGTSGTSRASSPGTSRSPGTSASPTTAAPGTPSTASPPSTAAPGTPSAPTPTGTGP
PLWRRSAQPESLAGQGTPSRGQISVESGPRALPTPKRRPAARASQPGGTSGTSGASSPVV
TRSTGTSGPTEANPTTSSVPGTTAGPGTSSAASTASTAPPATTSAATPTGSTAVTFGTTL
TPGKCSTVFQSRLSFEATASIESSSPDSKLHGHIASVNDNLFIFPVSHKDFIILLCLFSE
ATTLTERPGTTGTGLKTESNSGRSTSRIHSSTSVAPGSTVTESLFKAGCPETRPPAPVCH
GPLGEEKSPGDSWTSNCYQCTCTNAKTVDCQPKDCPSLPTCKTGEKLVVFTSNDTCCEVG
YCEPRTCFYNNTDYEIGASFEDPSNPCISYSCSDTGLVAVVQSCPKQTWCAEKERTYDSN
KCCYKCNTNCRTSPVNVTVNYNNCKKKVEMARCVGECKKTLQYNYEVFQLKNSCLCCREE
NYEYIDIDLDCPDGSTLSYQYRHTTTCSCADLCQNS
Download sequence
Identical sequences ENSCPOP00000016271 ENSCPOP00000016271 10141.ENSCPOP00000016271

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