SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCPOP00000018841 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCPOP00000018841
Domain Number 1 Region: 24-323
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 2.93e-25
Family Rhodopsin-like 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000018841   Gene: ENSCPOG00000027470   Transcript: ENSCPOT00000026488
Sequence length 329
Comment pep:known scaffold:cavPor3:scaffold_70:4620671:4621657:1 gene:ENSCPOG00000027470 transcript:ENSCPOT00000026488 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MESMPHLALQGSQLRQQGMGRMAASEVVTGVIFLSQILIGVLGNSSLLYHYLFLYFTGCR
LKCTDLILKHLIVANLLTLLCRGVPHTMEAFGWQVSLGNVGCKLLFYFHRVGRGGTIGII
CFLNVFQAITISPRNSKWAELKLKASKYFGLTLCLIWVLYSLVNVIFLMYMTGIWNKENH
TGLKYYGYCSSVRHDKTSESLHAALLSLPDALCVGLMIGTSSSMVSVLYRHRQKMRHIHK
TNVSPRSSPESRATKHVLLLVLTYVCFYTLSCIFQVCLSLIYNPTSFLVNISSIVAGFFP
AVSPLLLLRCESRVSKFCFACVRNGKAPI
Download sequence
Identical sequences ENSCPOP00000018841 10141.ENSCPOP00000018841 ENSCPOP00000018841

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]