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Domain assignment for ENSCPOP00000020478 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000020478
Domain Number 1 Region: 433-604
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.07e-36
Family SPRY domain 0.0026
Further Details:      
 
Domain Number 2 Region: 65-139
Classification Level Classification E-value
Superfamily RING/U-box 1.55e-18
Family RING finger domain, C3HC4 0.018
Further Details:      
 
Domain Number 3 Region: 198-263
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.000000000000087
Family B-box zinc-binding domain 0.00076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000020478   Gene: ENSCPOG00000024202   Transcript: ENSCPOT00000024940
Sequence length 613
Comment pep:known scaffold:cavPor3:scaffold_76:130232:136552:-1 gene:ENSCPOG00000024202 transcript:ENSCPOT00000024940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LPNRPGRLVRWFETRRHSPVCRAAMNMALPDMQKVPGPDQDQDPASKPPHSQFRMSMNRN
LCKCEDQFLCPICLEVFRDPITTTCGHNFCMTCLQNFWDHQAAVGEMYHCPQCRESFPSR
PELRKNVILENLVTCITQAKGQVSRPSRNLAGPKDVPCDFCFPQKLRSVKSCLQCVASLC
EKHLRSHYDDQVFQDHQLLEPVWDLKTRLCRKHHKLRRLYCHTEGRSVCRACLLEEHKNH
RTTPLEEERARMEVEVRKVQANVENQMLIIASDSQKHQGRVAFLSKLTQTTRDEVNTCFS
DIVHEIKQLQMKVLDFVEKEKMDALGKLGSSIQQSHNRLLKLEGNSVWLHTLLTNRSDEQ
FLQEFPMLRTLPACKEPLMGIDCEETQSFLQLSEILAELRARLVDVGLNFVNQLFTKGIR
MNSYEVLPPAVDRKTLLQCYCNLNFDSSTASEELILFKETHSVLNLGILLEPQATVGPML
GFKQWPQVLCSRALSEGRHYWEAEVSNSWVCLGVTYHRSHVSYLLGRNAHSWCLEWDSLR
LSAWHDNSQTVLRGAYHRVLGVALDLGAGCLSFYSVAGGVSLLYRFLATFLEPLYPAVMV
GSGPGSLSGGPEL
Download sequence
Identical sequences ENSCPOP00000020478 ENSCPOP00000020478 10141.ENSCPOP00000020478

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