SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCPOP00000020831 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCPOP00000020831
Domain Number 1 Region: 2-306
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 5.77e-83
Family Rhodopsin-like 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000020831   Gene: ENSCPOG00000026549   Transcript: ENSCPOT00000025052
Sequence length 306
Comment pep:known scaffold:cavPor3:scaffold_191:666813:667730:1 gene:ENSCPOG00000026549 transcript:ENSCPOT00000025052 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGPGNTTMMVTEFIILGFGDLKELNPLLFLLFGGIYLATISGNLLLVALVITQRRLQTPM
YFFLANLSCLEVCYTSNIVPKMLVDLLRENKVISMVGCVIQLYFFGALGSTECYLLAVMS
YDRYLAVCRPLHYSTLMHRAMCGGLVIGSWFTGFTVAAAFQAAMVSSLTFCGDNEIDHFF
CDLKPLQKLSCSDPYLVNIVCMSLTALVTLAPFGLTLGSYWRILSVVLHIPSNTGRQKAF
STCSSHLVVVTLFYGTLILVYAVPLAGQLPAVNKTFSLLYTVVTPMCNPLIYSLKNRDVR
EALRNL
Download sequence
Identical sequences ENSCPOP00000020831 10141.ENSCPOP00000020831 ENSCPOP00000020831

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]