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Domain assignment for ENSCPOP00000009958 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000009958
Domain Number 1 Region: 1-199
Classification Level Classification E-value
Superfamily L domain-like 2.38e-37
Family Ngr ectodomain-like 0.055
Further Details:      
 
Domain Number 2 Region: 477-591
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 4.97e-28
Family Calponin-homology domain, CH-domain 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000009958   Gene: ENSCPOG00000011077   Transcript: ENSCPOT00000011180
Sequence length 595
Comment pep:novel scaffold:cavPor3:scaffold_6:56676365:56767444:1 gene:ENSCPOG00000011077 transcript:ENSCPOT00000011180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
DLSKNRLVEVPMELCHFVSLEILNLYHNCIRVIPEAIINLQMLTYLNLSRNQLSSLPACL
CGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRRNY
LKVLPPELVDLPLVKFDFSCNKVLVIPICFREMKQLQVLLLENNPLQSPPAQICTKGKVH
IFKYLSIQACQIKTSDSLYLHAMERPHLHQQVEDSKKDSDSGVGSDNGDKRLSATEPSDE
DAVSLNVPMSNIMEEEQTVQEDVCRRLTPAAGEFHQEFQPEPSLLGDSNNSEQERDQLAD
GADVLHSGFMSYIKDREEDCEELLRIEEDAHWQNEGIISSSKDQDVDIAMIEQLREAVDL
LQDPNGLSTDITERSILNLYPMGTAEDLELPDSALNGQIELETPAVCEVQNDLTLQSNGS
QYSPDEMRENSPTMFPTINSTAPFGLKPRSVFQRPQRNLESIDPQFTIRRKMEQLREEKE
LVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLVNHIRPRSVASIHVPSPAVPKLSMAK
CRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLVKVGITVQALLDVTVTKTLFT
Download sequence
Identical sequences ENSCPOP00000009958 10141.ENSCPOP00000009958 ENSCPOP00000009958

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